RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GDAQ9Y2T3 454 aa1.04□□□□□ -2.24
RNU6-239P-201ENST00000390990 DERAQ9Y315 318 aa1.04□□□□□ -2.24
RNU6-239P-201ENST00000390990 CEPT1Q9Y6K0 416 aa1.04□□□□□ -2.24
RNU6-239P-201ENST00000390990 A0A087WUV0 522 aaPredicted RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 TEX13DA0A0J9YY54 714 aaPredicted RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF354AO60765 605 aaPredicted RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 NXPH2O95156 264 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF19P17023 458 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 POU1F1P28069 291 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 HALP42357 657 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 HUNKP57058 714 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 CDR2Q01850 454 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 FASTKD3Q14CZ7 662 aaKnown RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 HLA-BQ31612 363 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 CTXN3Q4LDR2 81 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 PRR30Q53SZ7 412 aaPredicted RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 NDUFAF5Q5TEU4 345 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 TXNDC8Q6A555 127 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 PGBD2Q6P3X8 592 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 PAPD4Q6PIY7 484 aaKnown RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 VITQ6UXI7 678 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 CEACAM19Q7Z692 300 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 C11orf96Q7Z7L8 435 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZBED8Q8IZ13 594 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 GPD1LQ8N335 351 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 RAB42Q8N4Z0 105 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 HPSE2Q8WWQ2 592 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 SLCO2A1Q92959 643 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 PABPC5Q96DU9 382 aaKnown RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 PPP1R13BQ96KQ4 1090 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 C1orf147Q96MC9 270 aaPredicted RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 ZNF285Q96NJ3 590 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 GAL3ST4Q96RP7 486 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 USP28Q96RU2 1077 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 RMDN3Q96TC7 470 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 KRT12Q99456 494 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 CD180Q99467 661 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 EYA3Q99504 573 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 FUCA2Q9BTY2 467 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 IFIH1Q9BYX4 1025 aaKnown RBP1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 CTSZQ9UBR2 303 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 SUFUQ9UMX1 484 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 SLC6A5Q9Y345 797 aa1.03□□□□□ -2.24
RNU6-239P-201ENST00000390990 MSGN1A6NI15 193 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 PEX12O00623 359 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 SEC14L5O43304 696 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 BUD23O43709 281 aaKnown RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 GPRIN2O60269 458 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 TACC1O75410 805 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 GALTP07902 379 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 MGMTP16455 207 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 ZNF32P17041 273 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 OPRL1P41146 370 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 MMP15P51511 669 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 THOP1P52888 689 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 CTSCP53634 463 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 RNPS1Q15287 305 aaKnown RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 TIGD6Q17RP2 521 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 RAB6CQ53S08 254 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 Q7L0L9 218 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 PTAR1Q7Z6K3 402 aaPredicted RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 SRLQ86TD4 932 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 LSMEM2Q8N112 164 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 UTP15Q8TED0 518 aaKnown RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 RUFY2Q8WXA3 655 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 DNAAF4Q8WXU2 420 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 PDLIM5Q96HC4 596 aaKnown RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 ZNF577Q9BSK1 485 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 DGCR6LQ9BY27 220 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 KRTAP4-1Q9BYQ7 146 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 GLIS2Q9BZE0 524 aaPredicted RBP1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 RAB6CQ9H0N0 254 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 TNFRSF19Q9NS68 423 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 ALKBH4Q9NXW9 302 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 HSPB7Q9UBY9 170 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 CRCT1Q9UGL9 99 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 VSIG4Q9Y279 399 aa1.02□□□□□ -2.25
RNU6-239P-201ENST00000390990 OR6C76A6NM76 312 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 MPTX1A8MV57 137 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 IPO5O00410 1097 aaKnown RBP1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 DNM1LO00429 736 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 GPR137BO60478 399 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 FAM155BO75949 473 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 HPRP00739 348 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 HOXD4P09016 255 aaPredicted RBP1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 PIK3R1P27986 724 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 MMP12P39900 470 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 MAGEA11P43364 429 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 MAPK9P45984 424 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 ZFP36L2P47974 494 aaKnown RBP1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 CDH11P55287 796 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 GSDMDP57764 484 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 MAD2L1Q13257 205 aaPredicted RBP1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 GPR17Q13304 367 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 EIPR1Q53HC9 387 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 WLSQ5T9L3 541 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 LCN10Q6JVE6 187 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 CACNA2D4Q7Z3S7 1137 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 ZNF354CQ86Y25 554 aa1.01□□□□□ -2.25
RNU6-239P-201ENST00000390990 PTOV1Q86YD1 416 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms