RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GRPEL2Q8TAA5 225 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 JPH3Q8WXH2 748 aaPredicted RBP14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF566Q969W8 418 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 ZHX1-C8orf76Q96EF9 292 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 TMEM74Q96NL1 305 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 COQ7Q99807 217 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 CDT1Q9H211 546 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 NUDT5Q9UKK9 219 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.08
VPS9D1-201ENST00000389386 NRCAMQ92823 1304 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 H0Y626 953 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 TRIM16O95361 564 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 PCNAP12004 261 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 TSPAN8P19075 237 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 CYP2B6P20813 491 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 KPNA2P52292 529 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 CDK5R2Q13319 367 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 DGCR6Q14129 220 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 CLCA4Q14CN2 919 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 UGP2Q16851 508 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 CADM2Q8N3J6 435 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 C1orf127Q8N9H9 656 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 AFG1LQ8WV93 481 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 TTC9Q92623 222 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 PHF21BQ96EK2 531 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 MLPHQ9BV36 600 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 RUBCNLQ9H714 662 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 SDR39U1Q9NRG7 319 aaPredicted RBP14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 GIMAP4Q9NUV9 329 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 STMN3Q9NZ72 180 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 KCNN3Q9UGI6 736 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 CPA4Q9UI42 421 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 AKT3Q9Y243 479 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 SPEF1Q9Y4P9 236 aa14.52□□□□□ -0.09
VPS9D1-201ENST00000389386 A0A087X1B8 175 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 IGKV6-21A0A0C4DH24 114 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 LOC100130705A0A1B0GUX0 176 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 FAM92AA1XBS5 289 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 METTL15A6NJ78 407 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PTPN3P26045 913 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PSMB9P28065 219 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 MTHFRP42898 656 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ST13P50502 369 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 OR4D2P58180 307 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 TTLL4Q14679 1199 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ZNF691Q5VV52 312 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 C12orf29Q8N999 325 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PSD4Q8NDX1 1056 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 GPRC5AQ8NFJ5 357 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 RMDN1Q96DB5 314 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 CYP3A43Q9HB55 503 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PAQR5Q9NXK6 330 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ASPDHA6ND91 283 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ACKR2O00590 384 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 SSX4O60224 188 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 TULP3O75386 442 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ALOX12P18054 663 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 ARNTP27540 789 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 DDOSTP39656 456 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 MASP1P48740 699 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 NDST1P52848 882 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 GPLD1P80108 840 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 MBTD1Q05BQ5 628 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 CSHL1Q14406 222 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 GOLGA7BQ2TAP0 167 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 YIF1BQ5BJH7 314 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 Q5BKY6 102 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 SULT1C3Q6IMI6 304 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 OTOP3Q7RTS5 596 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PHYKPLQ8IUZ5 450 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 CCDC28AQ8IWP9 274 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 SYTL1Q8IYJ3 562 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PARP16Q8N5Y8 322 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 FBLIM1Q8WUP2 373 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 HSFY1Q96LI6 401 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 DMRTB1Q96MA1 342 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 NSMCE2Q96MF7 247 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 DCSTAMPQ9H295 470 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PIF1Q9H611 641 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 KAT8Q9H7Z6 458 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 TM9SF3Q9HD45 589 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 CHST12Q9NRB3 414 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 WDR70Q9NW82 654 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 PTGDR2Q9Y5Y4 395 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 LRRC37A2A6NM11 1700 aa14.51□□□□□ -0.09
VPS9D1-201ENST00000389386 A0A1W2PP18 115 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 H3BMM5 538 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PRMT5O14744 637 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 RAP2AP10114 183 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PKLRP30613 574 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 ZNF45Q02386 682 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 FADDQ13158 208 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 NXNL2Q5VZ03 156 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 GLYATQ6IB77 296 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 CES5AQ6NT32 575 aa14.5□□□□□ -0.09
VPS9D1-201ENST00000389386 PLPPR4Q7Z2D5 763 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms