RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 NLNQ9BYT8 704 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 SLC7A5P2Q9GIP4 190 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 TRIM39Q9HCM9 518 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 SLC40A1Q9NP59 571 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 ETNK2Q9NVF9 386 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 SOHLH2Q9NX45 425 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 DTLQ9NZJ0 730 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 TMEM63CQ9P1W3 806 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 DNPEPQ9ULA0 475 aa9.45□□□□□ -0.9
IFT88-203ENST00000389373 HIVEP3Q5T1R4 2406 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 TCRBV5S1A1TA0A578 114 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 EIF3CLB5ME19 914 aaKnown RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 MASP2O00187 686 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 LDB2O43679 373 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 PRPSAP2O60256 369 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 FZD6O60353 706 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 MTX2O75431 263 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 RNF8O76064 485 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 LCA5LO95447 670 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 IDSP22304 550 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ITGA3P26006 1051 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 HALP42357 657 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ARCN1P48444 511 aaKnown RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 TUBB4BP68371 445 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 HSD11B2P80365 405 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 DSC2Q02487 901 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 CAMK4Q16566 473 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ANKRD20A8PQ5CZ79 823 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 CRB2Q5IJ48 1285 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 RALGPS1Q5JS13 557 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ZNF569Q5MCW4 686 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 PPP1R15BQ5SWA1 713 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 TMTC4Q5T4D3 741 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 HENMT1Q5T8I9 393 aaKnown RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 KLHL35Q6PF15 583 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ABRAXAS1Q6UWZ7 409 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ZNF517Q6ZMY9 492 aaPredicted RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 CUZD1Q86UP6 607 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 RAB43Q86YS6 212 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 RBM12BQ8IXT5 1001 aaKnown RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 DSELQ8IZU8 1212 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 CLEC1AQ8NC01 280 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 CPT1BQ92523 772 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 TM9SF4Q92544 642 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ZNF501Q96CX3 271 aaPredicted RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 EIF3CQ99613 913 aaKnown RBP9.44□□□□□ -0.9
IFT88-203ENST00000389373 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 RAB33BQ9H082 229 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 GANQ9H2C0 597 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 ZWILCHQ9H900 591 aa9.44□□□□□ -0.9
IFT88-203ENST00000389373 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 H3BRJ5 948 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 PEX12O00623 359 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 SLC4A1P02730 911 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 FECHP22830 423 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 MIPP30301 263 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 ARL4AP40617 200 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 CDH6P55285 790 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 DPYSQ14117 519 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 MYBPC3Q14896 1274 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 PTCHD3Q3KNS1 767 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 MLIPQ5VWP3 458 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 KMT5CQ86Y97 462 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 PARP9Q8IXQ6 854 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 MCOLN2Q8IZK6 566 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 GALNT16Q8N428 558 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 D2HGDHQ8N465 521 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 GPR150Q8NGU9 434 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 GRHL3Q8TE85 626 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 HSPH1Q92598 858 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 FER1L6-AS2Q96M78 137 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 TRAPPC9Q96Q05 1148 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 TLR10Q9BXR5 811 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 POLR1EQ9GZS1 481 aaKnown RBP9.43□□□□□ -0.9
IFT88-203ENST00000389373 ZNF552Q9H707 407 aaPredicted RBP9.43□□□□□ -0.9
IFT88-203ENST00000389373 PCDH9Q9HC56 1237 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 ZBTB20Q9HC78 741 aaPredicted RBP9.43□□□□□ -0.9
IFT88-203ENST00000389373 HRASLS2Q9NWW9 162 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 TAB2Q9NYJ8 693 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 SEMA5BQ9P283 1151 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 PSMD13Q9UNM6 376 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 CENPEQ02224 2701 aa9.43□□□□□ -0.9
IFT88-203ENST00000389373 TLCD2A6NGC4 264 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 TMCO5BA8MYB1 307 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 ATMINO43313 823 aaPredicted RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 KLHL41O60662 606 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 IPO13O94829 963 aaKnown RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 CDK14O94921 469 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 ZBTB11O95625 1053 aaPredicted RBP9.42□□□□□ -0.9
IFT88-203ENST00000389373 CAPN1P07384 714 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 COX6B1P14854 86 aa9.42□□□□□ -0.9
IFT88-203ENST00000389373 VCLP18206 1134 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms