RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PPIGQ13427 754 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ACVR2BQ13705 512 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLC35E4Q6ICL7 350 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 LINGO4Q6UY18 593 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 CPLX4Q7Z7G2 160 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 GALNT5Q7Z7M9 940 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 TICAM1Q8IUC6 712 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 WDSUB1Q8N9V3 476 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 RDM1Q8NG50 284 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 OR8K5Q8NH50 307 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 LRRC8CQ8TDW0 803 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 UTP15Q8TED0 518 aaKnown RBP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 TMEM190Q8WZ59 177 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 SMPDL3BQ92485 455 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 USP6NLQ92738 828 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 HDAC2Q92769 488 aaKnown RBP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ST6GAL2Q96JF0 529 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 EPYCQ99645 322 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLX1AQ9BQ83 275 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 C1QTNF1Q9BXJ1 281 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 LRMDAQ9H2I8 198 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZNF696Q9H7X3 374 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZBTB20Q9HC78 741 aaPredicted RBP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 SETD4Q9NVD3 440 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 TAAR2Q9P1P5 351 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 AASSQ9UDR5 926 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 NENFQ9UMX5 172 aa2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZNF644Q9H582 1327 aaPredicted RBP2.16□□□□□ -2.06
RNU6-541P-201ENST00000384709 TEX13DA0A0J9YY54 714 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 C15orf62A8K5M9 175 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 H0YIN7 160 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 PLPP2O43688 288 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 PCDH7O60245 1069 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 SOCS5O75159 536 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 PTP4A3O75365 173 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 LDLRP01130 860 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TFAP2AP05549 437 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TUBBP07437 444 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ACADMP11310 421 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 RARGP13631 454 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 GABRB1P18505 474 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CAPN3P20807 821 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 MCCP23508 829 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 NFKBIAP25963 317 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 MAPK4P31152 587 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 HOXC8P31273 242 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ARL3P36405 182 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 GALCP54803 685 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TUBB4BP68371 445 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 COG7P83436 770 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 SETQ01105 290 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 MAMLD1Q13495 774 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CRYMQ14894 314 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 FCN2Q15485 313 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 MED22Q15528 200 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CCDC96Q2M329 555 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ZC2HC1CQ53FD0 456 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TECRLQ5HYJ1 363 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 WDR38Q5JTN6 314 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 FAAH2Q6GMR7 532 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 KLHL35Q6PF15 583 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 PACS1Q6VY07 963 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 RAD9BQ6WBX8 426 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 SLC26A9Q7LBE3 791 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 NOTCH2NLQ7Z3S9 236 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 PIWIL4Q7Z3Z4 852 aaKnown RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 FOXP4Q8IVH2 680 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ADGRF2Q8IZF7 708 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 SLC5A8Q8N695 610 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TEX19Q8NA77 164 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ANKRD52Q8NB46 1076 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 OR10V1Q8NGI7 309 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 GRAPLQ8TC17 118 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 FCAMRQ8WWV6 532 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 EVI5LQ96CN4 794 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 FBXO17Q96EF6 278 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CMTM3Q96MX0 182 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 LITAFQ99732 161 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TREX2Q9BQ50 279 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TFB2MQ9H5Q4 396 aaKnown RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 RRP7BPQ9NSQ0 103 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 IRAK4Q9NWZ3 460 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 ZNF624Q9P2J8 865 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 TSPYL4Q9UJ04 414 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 DBNLQ9UJU6 430 aaKnown RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CORO1CQ9ULV4 474 aaPredicted RBP2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 CMAHPQ9Y471 501 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 YIPF1Q9Y548 306 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 SESN1Q9Y6P5 492 aa2.15□□□□□ -2.07
RNU6-541P-201ENST00000384709 DISP3Q9P2K9 1392 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 MYO1GB0I1T2 1018 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 SMIM1B2RUZ4 78 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 BLOC1S5-TXNDC5H3BN57 136 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 J3QR06 171 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 HS6ST1O60243 411 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 BAIAP3O94812 1187 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 GAS8-AS1O95177 125 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 GCNT3O95395 438 aa2.14□□□□□ -2.07
RNU6-541P-201ENST00000384709 TSHBP01222 138 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms