RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SLC26A11Q86WA9 606 aa18.54■□□□□ 0.56
SMN2-202ENST00000380742 PHACTR4Q8IZ21 702 aa18.54■□□□□ 0.56
SMN2-202ENST00000380742 BEND7Q8N7W2 519 aaPredicted RBP18.54■□□□□ 0.56
SMN2-202ENST00000380742 UBLCP1Q8WVY7 318 aaPredicted RBP18.54■□□□□ 0.56
SMN2-202ENST00000380742 CDKL2Q92772 493 aa18.54■□□□□ 0.56
SMN2-202ENST00000380742 BIRC8Q96P09 236 aa18.54■□□□□ 0.56
SMN2-202ENST00000380742 ZNHIT2Q9UHR6 403 aa18.54■□□□□ 0.56
SMN2-202ENST00000380742 PRMT5O14744 637 aaPredicted RBP18.53■□□□□ 0.56
SMN2-202ENST00000380742 PFDN6O15212 129 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 RASGRP1O95267 797 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 TNFP01375 233 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 NME1P15531 152 aaKnown RBP18.53■□□□□ 0.56
SMN2-202ENST00000380742 JUNDP17535 347 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 ENGP17813 658 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 RPS3P23396 243 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMN2-202ENST00000380742 FMO4P31512 558 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 HSD17B3P37058 310 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 ABCG1P45844 678 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 EIF3BP55884 814 aaKnown RBP18.53■□□□□ 0.56
SMN2-202ENST00000380742 BRD3Q15059 726 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 SF3A2Q15428 464 aaKnown RBP18.53■□□□□ 0.56
SMN2-202ENST00000380742 ZNF423Q2M1K9 1284 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CTSL3PQ5NE16 218 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 ZNF549Q6P9A3 640 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CRTC3Q6UUV7 619 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 STRA8Q7Z7C7 330 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 C11orf96Q7Z7L8 435 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 GALNT7Q86SF2 657 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 GALNT13Q8IUC8 556 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 TRAPPC5Q8IUR0 188 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CTAGE3PQ8IX95 158 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 PPM1NQ8N819 430 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CYTH2Q99418 400 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 ELF4Q99607 663 aaPredicted RBP18.53■□□□□ 0.56
SMN2-202ENST00000380742 ZDHHC5Q9C0B5 715 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CLPBQ9H078 707 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 IL21RQ9HBE5 538 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 TM7SF3Q9NS93 570 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 GPR34Q9UPC5 381 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 VPS9D1Q9Y2B5 631 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 PLEKHM1Q9Y4G2 1056 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 GPSM3Q9Y4H4 160 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 ST14Q9Y5Y6 855 aa18.53■□□□□ 0.56
SMN2-202ENST00000380742 CCDC151A5D8V7 595 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 AP2A2O94973 939 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 SYPP08247 313 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 PRLHRP49683 370 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 ADARP55265 1226 aaKnown RBP18.52■□□□□ 0.55
SMN2-202ENST00000380742 SHBQ15464 509 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 MAP9Q49MG5 647 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 BCL7AQ4VC05 210 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 LRRTM4Q86VH4 590 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 DCLK2Q8N568 766 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 OR2I1PQ8NGU4 316 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 OR2M4Q96R27 311 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 MCMBPQ9BTE3 642 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 TMEM168Q9H0V1 697 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 GAREM1Q9H706 876 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 PARD6AQ9NPB6 346 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 SEMA4GQ9NTN9 838 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 NSMCE4AQ9NXX6 385 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 SLC23A2Q9UGH3 650 aa18.52■□□□□ 0.55
SMN2-202ENST00000380742 OTOGLQ3ZCN5 2332 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 LNP1A1A4G5 178 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 IQCF5A8MTL0 148 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 KMOO15229 486 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 FAM155BO75949 473 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 TGM1P22735 817 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 RXRGP48443 463 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 CD151P48509 253 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 BLKP51451 505 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 TCEA2Q15560 299 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 PLA2G4EQ3MJ16 856 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 IL27RAQ6UWB1 636 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 CHST15Q7LFX5 561 aaPredicted RBP18.51■□□□□ 0.55
SMN2-202ENST00000380742 LRRC6Q86X45 466 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 MREGQ8N565 214 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 OXR1Q8N573 874 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 LKAAEAR1Q8TD35 194 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 ZNF514Q96K75 400 aaPredicted RBP18.51■□□□□ 0.55
SMN2-202ENST00000380742 CPNE1Q99829 537 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 GTPBP2Q9BX10 602 aaKnown RBP18.51■□□□□ 0.55
SMN2-202ENST00000380742 SLC13A1Q9BZW2 595 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 APOBEC3BQ9UH17 382 aaKnown RBP18.51■□□□□ 0.55
SMN2-202ENST00000380742 PCDHB1Q9Y5F3 818 aa18.51■□□□□ 0.55
SMN2-202ENST00000380742 ARHGEF17Q96PE2 2063 aaPredicted RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 A0A1B0GTQ1 180 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 LRP3O75074 770 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 POP7O75817 140 aaKnown RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 ESR1P03372 595 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 CELA2BP08218 269 aaPredicted RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 PKMP14618 531 aaKnown RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 BNIP3Q12983 259 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 NAB1Q13506 487 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 CSRP2Q16527 193 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 PTRHD1Q6GMV3 140 aaKnown RBP18.5■□□□□ 0.55
SMN2-202ENST00000380742 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
SMN2-202ENST00000380742 ZC3HC1Q86WB0 502 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms