RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 KLHL17Q6TDP4 642 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TEX261Q6UWH6 196 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TIFABQ6ZNK6 161 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 C17orf107Q6ZR85 190 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TMC8Q8IU68 726 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 OR9I1Q8NGQ6 314 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ATOH1Q92858 354 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 LINC00052Q96N35 136 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC4A9Q96Q91 983 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DCLRE1CQ96SD1 692 aaKnown RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DPCDQ9BVM2 203 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 APOL5Q9BWW9 433 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 PIF1Q9H611 641 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ASB7Q9H672 318 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ACAD9Q9H845 621 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM118AQ9NWS6 357 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 SEPT9Q9UHD8 586 aaPredicted RBP8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 ACSL5Q9ULC5 683 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 LYVE1Q9Y5Y7 322 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 U3KQ87 197 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 UBR1Q8IWV7 1749 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 MROH5Q6ZUA9 1318 aa8.43□□□□□ -1.06
NHLRC3-201ENST00000379599 TRBV23-1A0A0A0MS06 115 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC15A5A6NIM6 579 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 FAM159BA6NKW6 160 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 EEF2KO00418 725 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ARPC2O15144 300 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 RECQL5O94762 991 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 EPOP01588 193 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PRKCGP05129 697 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CNTFP26441 200 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 GRIA4P48058 902 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ALDH3A2P51648 485 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ROR1Q01973 937 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 FGFBP1Q14512 234 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 GRK1Q15835 563 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 DUSP6Q16828 381 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PDSS1Q5T2R2 415 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 BSPRYQ5W0U4 402 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF425Q6IV72 752 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CHMP1BQ7LBR1 199 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PLD6Q8N2A8 252 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 TXNDC5Q8NBS9 432 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC9A7Q96T83 725 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PI4K2AQ9BTU6 479 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 TTYH1Q9H313 450 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF385DQ9H6B1 395 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CYP4F12Q9HCS2 524 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 GTSE1Q9NYZ3 720 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 COPZ2Q9P299 210 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 MLXQ9UH92 298 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 AXIN2Q9Y2T1 843 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 HES2Q9Y543 173 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PCDHGB2Q9Y5G2 931 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 NME4O00746 187 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CHMP2AO43633 222 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF623O75123 536 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SNX4O95219 450 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ANGPTL1O95841 491 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ZNF806P0C7X5 589 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SAT1P21673 171 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 LIG4P49917 911 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PRKAA1Q13131 559 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 QPRTQ15274 297 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ZYG11AQ6WRX3 759 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 RASGRP3Q8IV61 690 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 IFNL2Q8IZJ0 200 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 TMC2Q8TDI7 906 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 Q96MT0 163 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 MCEEQ96PE7 176 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 QKIQ96PU8 341 aaKnown RBP eCLIP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 NPAS1Q99742 590 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC30A2Q9BRI3 323 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 C1QTNF1Q9BXJ1 281 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC22A4Q9H015 551 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 PLAC1Q9HBJ0 212 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SPON1Q9HCB6 807 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 SLC22A7Q9Y694 548 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 E9PAM4 449 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 F5H423 210 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 UBDO15205 165 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 EIF3DO15371 548 aaKnown RBP eCLIP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 HUS1O60921 280 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ERN1O75460 977 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 USP2O75604 605 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 MT-ND2P03891 347 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 LCKP06239 509 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 GPIP06744 558 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CFHP08603 1231 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 F7P08709 466 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 ARFIP1P53367 373 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 AIF1P55008 147 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 RPP38P78345 283 aaKnown RBP8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 CRADDP78560 199 aa8.42□□□□□ -1.06
NHLRC3-201ENST00000379599 MADCAM1Q13477 382 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms