RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SLC7A2P52569 658 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 NADK2Q4G0N4 442 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 Q8N402 240 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 KLHL36Q8N4N3 616 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 NR4A3Q92570 626 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 DPF2Q92785 391 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 NYAP2Q9P242 653 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SIX4Q9UIU6 781 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ASF1AQ9Y294 204 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MAPKBP1O60336 1514 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ARID1BQ8NFD5 2236 aaPredicted RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 H0YIN7 160 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 H7C417 338 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 STK17BO94768 372 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 LTFP02788 710 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 GBX2P52951 348 aaPredicted RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 TOB2Q14106 344 aaPredicted RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 RRP1BQ14684 758 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 RABL3Q5HYI8 236 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 DCST1Q5T197 706 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 GALNT5Q7Z7M9 940 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 KLHL6Q8WZ60 621 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PGAP3Q96FM1 320 aaPredicted RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 TMEM248Q9NWD8 314 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 LTA4HP09960 611 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 DGKAP23743 735 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 GABRB2P47870 512 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 EIF2B1Q14232 305 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 CYP2A13Q16696 494 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CBWD3Q5JTY5 395 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CBWD5Q5RIA9 395 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 LYPLAL1Q5VWZ2 237 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ZFP82Q8N141 532 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CBR4Q8N4T8 237 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SELENOMQ8WWX9 145 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 TBC1D17Q9HA65 648 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PCYOX1Q9UHG3 505 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 C13orf42A0A1B0GVH6 325 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 OR7A17O14581 309 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 FADS1O60427 444 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 OTCP00480 354 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CHRNB2P17787 502 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SLC11A2P49281 568 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CDK3Q00526 305 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SNTA1Q13424 505 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SPATS1Q496A3 300 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 NKAPQ8N5F7 415 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 OR4Q3Q8NH05 313 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 COPS5Q92905 334 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 AP2M1Q96CW1 435 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 LRRC58Q96CX6 371 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ZMYM5Q9UJ78 669 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CIDEAO60543 219 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 IL3P08700 152 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 JUNDP17535 347 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 CHATP28329 748 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 SIK1P57059 783 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 SEC23BQ15437 767 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 UBE2SQ16763 222 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 C16orf46Q6P387 395 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 PGM2L1Q6PCE3 622 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.67□□□□□ -1.02
LIG3-202ENST00000378526 ANKRD23Q86SG2 305 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 VAT1Q99536 393 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 EBF3Q9H4W6 596 aa8.67□□□□□ -1.02
LIG3-202ENST00000378526 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 LRRN3E7EW58 273 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 LCMT2O60294 686 aaKnown RBP8.66□□□□□ -1.02
LIG3-202ENST00000378526 S100A8P05109 93 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 GNAZP19086 355 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 SERPINA4P29622 427 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
LIG3-202ENST00000378526 EVI2BP34910 448 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 SERPINB11Q96P15 392 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 SLITRK1Q96PX8 696 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 LRRN3Q9H3W5 708 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ALG2Q9H553 416 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 SEMA3GQ9NS98 782 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.66□□□□□ -1.02
LIG3-202ENST00000378526 TOR1BO14657 336 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 PSMD10O75832 226 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 PDE8BO95263 885 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ADAP00813 363 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 HCKP08631 526 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ZSCAN5DPP0CG00 497 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 CPB1P15086 417 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 BMP6P22004 513 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 CES1P23141 567 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 PPM1AP35813 382 aa8.66□□□□□ -1.02
LIG3-202ENST00000378526 ZNF177Q13360 481 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms