RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CCDC97Q96F63 343 aaPredicted RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 FBXL20Q96IG2 436 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 KCTD14Q9BQ13 255 aaPredicted RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 C9orf16Q9BUW7 83 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TTLL2Q9BWV7 592 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 PIF1Q9H611 641 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 DNMT3LQ9UJW3 386 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TMCO1Q9UM00 188 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 PIKFYVEQ9Y2I7 2098 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 PRAMEF12O95522 483 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 SLC10A3P09131 477 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CASP2P42575 452 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TTPAP49638 278 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 HTR6P50406 440 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 OR4D2P58180 307 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ARF5P84085 180 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CYBRD1Q53TN4 286 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 SLC2A7Q6PXP3 512 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 DLEU7Q6UYE1 221 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 LPCAT2Q7L5N7 544 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ERI1Q8IV48 349 aaKnown RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 SFRP1Q8N474 314 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 EFHBQ8N7U6 833 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 B4GALNT2Q8NHY0 566 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ADAMTS16Q8TE57 1224 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 GAB3Q8WWW8 586 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 KCNJ9Q92806 393 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 WBP2Q969T9 261 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 ZNF382Q96SR6 550 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 HBEGFQ99075 208 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 GKN1Q9NS71 199 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 TMEM161AQ9NX61 479 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 CD274Q9NZQ7 290 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 THEGQ9P2T0 379 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 LEF1Q9UJU2 399 aaPredicted RBP10.81□□□□□ -0.68
BEST1-201ENST00000378043 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
BEST1-201ENST00000378043 SYNCRIPO60506 623 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 CHEK2O96017 543 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CLCN7P51798 805 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 EMP3P54852 163 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 EEFSECP57772 596 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 HPCAP84074 193 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 EMX2Q04743 252 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 PLA2G4EQ3MJ16 856 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 ZRANB3Q5FWF4 1079 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 FUT10Q6P4F1 479 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 TTC33Q6PID6 262 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 TBPL2Q6SJ96 375 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 LINGO4Q6UY18 593 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 FNDC5Q8NAU1 212 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 BIRC7Q96CA5 298 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CASD1Q96PB1 797 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 MUC13Q9H3R2 512 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 SOX17Q9H6I2 414 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 TIMMDC1Q9NPL8 285 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 COMMD8Q9NX08 183 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 ZIM2Q9NZV7 527 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 ILVBLA1L0T0 632 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 FAM234BA2RU67 622 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 COCHO43405 550 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CLDN11O75508 207 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 SEC24DO94855 1032 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 ENO2P09104 434 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 BMP1P13497 986 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 HTR1EP28566 365 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 SLC11A2P49281 568 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CLCN4P51793 760 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 NAA20P61599 178 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 MTA1Q13330 715 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 SELPLGQ14242 412 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CXorf57Q6NSI4 855 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 ZFAND4Q86XD8 727 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 OFCC1Q8IZS5 231 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 BCL7CQ8WUZ0 217 aaPredicted RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 P2RY12Q9H244 342 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 SARS2Q9NP81 518 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 ZNF639Q9UID6 485 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 ANAPC2Q9UJX6 822 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 PTBP2Q9UKA9 531 aaKnown RBP10.8□□□□□ -0.68
BEST1-201ENST00000378043 V9GYQ6 96 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 CASP8AP2Q9UKL3 1982 aa10.8□□□□□ -0.68
BEST1-201ENST00000378043 H7C0S8 307 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 OR7A17O14581 309 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ANKRD28O15084 1053 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 STX7O15400 261 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 CA12O43570 354 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 SNAP91O60641 907 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 RSL1D1O76021 490 aaKnown RBP10.79□□□□□ -0.68
BEST1-201ENST00000378043 STC2O76061 302 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ALDH2P05091 517 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 RHOCP08134 193 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 C7P10643 843 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 CA5AP35218 305 aa10.79□□□□□ -0.68
BEST1-201ENST00000378043 ADARP55265 1226 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms