RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PTCHD4Q6ZW05 846 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 USP45Q70EL2 814 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 EPHX4Q8IUS5 362 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CSGALNACT1Q8TDX6 532 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 PHF10Q8WUB8 498 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 UBE2E3Q969T4 207 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TSGA13Q96PP4 275 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 XYLT2Q9H1B5 865 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 KLHL28Q9NXS3 571 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 DNMT3LQ9UJW3 386 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 AGO1Q9UL18 857 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TMCC2O75069 709 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 GLDCP23378 1020 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 HNF4AP41235 474 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TAF1CQ15572 869 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 FBXO43Q4G163 708 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TRIM40Q6P9F5 258 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TUBA3EQ6PEY2 450 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 C9orf43Q8TAL5 461 aaPredicted RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 BRSK1Q8TDC3 778 aa8.69□□□□□ -1.02
PCDH9-202ENST00000377865 TEFMQ96QE5 360 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
PCDH9-202ENST00000377865 QSOX1O00391 747 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ADAMDEC1O15204 470 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PAPSS2O95340 614 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 HLCSP50747 726 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PFKPQ01813 784 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 IRF8Q02556 426 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SIM2Q14190 667 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 MED22Q15528 200 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 TGFBIQ15582 683 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 CERS6Q6ZMG9 384 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ANKRD23Q86SG2 305 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZDHHC21Q8IVQ6 265 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PIK3C3Q8NEB9 887 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 STON2Q8WXE9 905 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 FBXL20Q96IG2 436 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF347Q96SE7 839 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ARMC1Q9NVT9 282 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PHF11Q9UIL8 331 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SIX4Q9UIU6 781 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 TNRC6CQ9HCJ0 1690 aaKnown RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 LAMB2P55268 1798 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 EDIL3O43854 480 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SERPINA1P01009 418 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 MMP3P08254 477 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 DSC2Q02487 901 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ANGPT1Q15389 498 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 TAF1AQ15573 450 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SULT1C3Q6IMI6 304 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 FAM131AQ6UXB0 335 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 AHSA2Q719I0 299 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ADCK2Q7Z695 626 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 CDH24Q86UP0 819 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 FBXO27Q8NI29 283 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 BIRC7Q96CA5 298 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 QRFPRQ96P65 431 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 KLHL5Q96PQ7 755 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ITPAQ9BY32 194 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZNF214Q9UL59 606 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 IRS2Q9Y4H2 1338 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 LOC100130705A0A1B0GUX0 176 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SOWAHBA6NEL2 793 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 FPGTO14772 594 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 OR4F21O95013 312 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SERPINA4P29622 427 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ASMTP46597 345 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SCN1BQ07699 218 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 KLHL35Q6PF15 583 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 CYP2U1Q7Z449 544 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 LIX1Q8N485 282 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 MINDY1Q8N5J2 469 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 OR10A6Q8NH74 314 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 TBATAQ96M53 351 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 FCRL3Q96P31 734 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SPATA5L1Q9BVQ7 753 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 RERGLQ9H628 205 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 A0A1W2PPW3 197 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 PDHXO00330 501 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 AP1G1O43747 822 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 NOBOXO60393 691 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 CLDN9O95484 217 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 MT-ND1P03886 318 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 SDC2P34741 201 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ATP5C1P36542 298 aaKnown RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 JAG1P78504 1218 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZDHHC20Q5W0Z9 365 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 DDX53Q86TM3 631 aaKnown RBP8.68□□□□□ -1.02
PCDH9-202ENST00000377865 ZBTB2Q8N680 514 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 OR4A15Q8NGL6 344 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 TP53INP1Q96A56 240 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 NLNQ9BYT8 704 aa8.68□□□□□ -1.02
PCDH9-202ENST00000377865 CEPT1Q9Y6K0 416 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms