RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MPP4Q96JB8 637 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 KAT8Q9H7Z6 458 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 POFUT2Q9Y2G5 429 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PCDHGA10Q9Y5H3 936 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 AK1P00568 194 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RPL10P27635 214 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TRA2BP62995 288 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SLC7A6OSQ96CW6 309 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MYNNQ9NPC7 610 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 VPS29Q9UBQ0 182 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MYF6P23409 242 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TAS2R42Q7RTR8 314 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MNTQ99583 582 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM161AQ9NX61 479 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1B0GVI7 797 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ADAM17P78536 824 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 BTKQ06187 659 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RAB43Q86YS6 212 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 NPY6RQ99463 290 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRD19PQ9H560 264 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SCUBE2Q9NQ36 999 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 UPP2O95045 317 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DGKGP49619 791 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TRAF7Q6Q0C0 670 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 JPH3Q8WXH2 748 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DHRS7Q9Y394 339 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PCDHB7Q9Y5E2 793 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SLC19A2O60779 497 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PRKD3O94806 890 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 IL31Q6EBC2 164 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LAPTM4BQ86VI4 370 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LACTBL1A8MY62 500 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DFFAO00273 331 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 JRKO75564 520 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 S100GP29377 79 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 C10orf107Q8IVU9 208 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LINC00116Q8NCU8 138 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CMTM7Q96FZ5 175 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 KCNH6Q9H252 994 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ACSL5Q9ULC5 683 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PHF24Q9UPV7 400 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MGAT4BQ9UQ53 548 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 BAIAP2Q9UQB8 552 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SERHLQ9NQF3 203 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CPNE7Q9UBL6 633 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CXCL9Q07325 125 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DAG1Q14118 895 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TESCQ96BS2 214 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MYRFLQ96LU7 910 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HNRNPCL2B2RXH8 293 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 F8W810 466 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CST1P01037 141 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SLC6A4P31645 630 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 USP41Q3LFD5 358 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 C16orf46Q6P387 395 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ATG4AQ8WYN0 398 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CDCA5Q96FF9 252 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SYT15Q9BQS2 421 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DBNDD1Q9H9R9 158 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PLCXD1Q9NUJ7 323 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 GPR25O00155 361 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 AKAP5P24588 427 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PTGR1Q14914 329 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 OSTF1Q92882 214 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DYRK1BQ9Y463 629 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 AXIN1O15169 862 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 POMCP01189 267 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SLC38A4Q969I6 547 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LRFN5Q96NI6 719 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM5Q9Y2B1 443 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TTLL8A6PVC2 850 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PTGS2P35354 604 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 KLK7P49862 253 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 IRF8Q02556 426 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SEC23BQ15437 767 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LRRC70Q7Z2Q7 622 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MED30Q96HR3 178 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ISYNA1Q9NPH2 558 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 GINS2Q9Y248 185 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 UGT2B10P36537 528 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PJA1Q8NG27 643 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ANGPT4Q9Y264 503 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 EPHA5P54756 1037 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PSMD4P55036 377 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HSF2Q03933 536 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 BCL2L1Q07817 233 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CDO1Q16878 200 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DENND5BQ6ZUT9 1274 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PSD4Q8NDX1 1056 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CHPT1Q8WUD6 406 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HDAC10Q969S8 669 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RNFT2Q96EX2 444 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 DRD2P14416 443 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 ALDH4A1P30038 563 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 FCGRTP55899 365 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 STARD3Q14849 445 aa4.88□□□□□ -1.63
PCDH9-201ENST00000377861 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms