RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GAB4Q2WGN9 574 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ATP13A5Q4VNC0 1218 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZNF805Q5CZA5 627 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CLEC6AQ6EIG7 209 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 MYO1HQ8N1T3 1032 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 ZBTB2Q8N680 514 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CLDN19Q8N6F1 224 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 TRPC4APQ8TEL6 797 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 PANX3Q96QZ0 392 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 COPS8Q99627 209 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 THTPAQ9BU02 230 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 CD248Q9HCU0 757 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 RAD18Q9NS91 495 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SPATS2LQ9NUQ6 558 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 GDE1Q9NZC3 331 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 DNAJC15Q9Y5T4 150 aa17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-201ENST00000374943 A0A088AWK7 358 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EIF3FO00303 357 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ENTPD5O75356 428 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CTSLP07711 333 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CBSLP0DN79 551 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TIMP2P16035 220 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CBSP35520 551 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ATP4BP51164 291 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CUL3Q13618 768 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CYLC2Q14093 348 aaPredicted RBP17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PPP1R3AQ16821 1122 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TRMT5Q32P41 509 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TTLL9Q3SXZ7 439 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ARSIQ5FYB1 569 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 LARP4Q71RC2 724 aaKnown RBP eCLIP17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SNX32Q86XE0 403 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PDPRQ8NCN5 879 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FGF13Q92913 245 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NUSAP1Q9BXS6 441 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CERS4Q9HA82 394 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CD274Q9NZQ7 290 aa17.77■□□□□ 0.43
HLA-DQB1-201ENST00000374943 LOC100653049A0A140TA62 436 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PPP6CO00743 305 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CIB2O75838 187 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KRT34O76011 436 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ARSAP15289 507 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PBX2P40425 430 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MAGEA10P43363 369 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ST8SIA6P61647 398 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 B4GALNT1Q00973 533 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KPNB1Q14974 876 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PCBP2Q15366 365 aaKnown RBP eCLIP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RFLNAQ6ZTI6 216 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FRA10AC1Q70Z53 315 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 DPPA4Q7L190 304 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EFL1Q7Z2Z2 1120 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TWIST2Q8WVJ9 160 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FAM83CQ9BQN1 747 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 DCLRE1BQ9H816 532 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PCDH12Q9NPG4 1184 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ELOVL2Q9NXB9 296 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 KCTD5Q9NXV2 234 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 SLC7A8Q9UHI5 535 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 OARD1Q9Y530 152 aa17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TNPO3Q9Y5L0 923 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NCF1BA6NI72 391 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NCF1CA8MVU1 366 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 E2F3O00716 465 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 UBDO15205 165 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RAD51BO15315 384 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CCNT2O60583 730 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TRIM16O95361 564 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 NCF1P14598 390 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 AGTR2P50052 363 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 IRX1P78414 480 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PTK2BQ14289 1009 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EIF4HQ15056 248 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PDGFRLQ15198 375 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ZRSR2Q15696 482 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ACSBG2Q5FVE4 666 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 LRRC73Q5JTD7 316 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PGM2L1Q6PCE3 622 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 OR56A4Q8NGH8 313 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GDPD5Q8WTR4 605 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 WDR60Q8WVS4 1066 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 TMPRSS11EQ9UL52 423 aa17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 G3BP2Q9UN86 482 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-201ENST00000374943 HEPACAM2A8MVW5 462 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 VPS4BO75351 444 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ESRRBO95718 433 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 S100BP04271 92 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ITGB6P18564 788 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FCARP24071 287 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 FOXA1P55317 472 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PKNOX1P55347 436 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RALGDSQ12967 914 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RARS2Q5T160 578 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 C6orf163Q5TEZ5 329 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MARK4Q96L34 752 aa17.74■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ZNF382Q96SR6 550 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms