RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SLC22A3O75751 556 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 JUNBP17275 347 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CRHBPP24387 322 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 EEFSECP57772 596 aaKnown RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 DSC2Q02487 901 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 GPNMBQ14956 572 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 COQ5Q5HYK3 327 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TMEM53Q6P2H8 277 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 RTN4RL1Q86UN2 441 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SPARTQ8N0X7 666 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 DCBLD1Q8N8Z6 715 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 PAPD5Q8NDF8 572 aaKnown RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 LINC01599Q8WXQ3 324 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 LPPQ93052 612 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SDCCAG3Q96C92 435 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 PPM1MQ96MI6 270 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 FUNDC2Q9BWH2 189 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TDRD1Q9BXT4 1180 aaKnown RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC52A3Q9NQ40 469 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 HPS4Q9NQG7 708 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 EVLQ9UI08 416 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 MEIS3P2A8K0S8 358 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 KDM1AO60341 852 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CAPN15O75808 1086 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC2A3P11169 496 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 MTHFD2P13995 350 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ARL1P40616 181 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 POLR2JP52435 117 aaKnown RBP10.98□□□□□ -0.65
CCDC40-203ENST00000374877 IST1P53990 364 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 LCP2Q13094 533 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 AQP6Q13520 282 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TUBA3CQ13748 450 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 MEP1AQ16819 746 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC2A7Q6PXP3 512 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TFAP2DQ7Z6R9 452 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ITFG1Q8TB96 612 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC22A17Q8WUG5 538 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 MAGED4Q96JG8 741 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF347Q96SE7 839 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 SLC25A51Q9H1U9 297 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 MFSD1Q9H3U5 465 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 TOR3AQ9H497 397 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 NTN4Q9HB63 628 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF639Q9UID6 485 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 BAG5Q9UL15 447 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 RNF112Q9ULX5 631 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 B3GNT3Q9Y2A9 372 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 CPQQ9Y646 472 aa10.98□□□□□ -0.65
CCDC40-203ENST00000374877 UBA6A0AVT1 1052 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 C16orf96A6NNT2 1141 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PTGES3LE9PB15 166 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 MAN1A2O60476 641 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SNX2O60749 519 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 BCAS1O75363 584 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 CNTN5O94779 1100 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PRDX3P30048 256 aaKnown RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SLC26A3P40879 764 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 MTPNP58546 118 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 KCNC4Q03721 635 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 CCDC92Q53HC0 331 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF549Q6P9A3 640 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 FBXO39Q8N4B4 442 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TMEM199Q8N511 208 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SCAMP5Q8TAC9 235 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ITPKCQ96DU7 683 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SH3YL1Q96HL8 342 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ACOX2Q99424 681 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 C11orf49Q9H6J7 331 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SMURF2Q9HAU4 748 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 AIG1Q9NVV5 245 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TMEM161AQ9NX61 479 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TBX21Q9UL17 535 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TSC22D4Q9Y3Q8 395 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 DYTNA2CJ06 578 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 FGF10O15520 208 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 NOBOXO60393 691 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 CNOT3O75175 753 aaKnown RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 EEDO75530 441 aaKnown RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 WISP3O95389 354 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ALDH2P05091 517 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ALPLP05186 524 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 CDH1P12830 882 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF37AP17032 561 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 MTHFRP42898 656 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 LHX1P48742 406 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SCNN1GP51170 649 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TLE2Q04725 743 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ZNF846Q147U1 533 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
CCDC40-203ENST00000374877 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ZDHHC13Q8IUH4 622 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 BLOC1S5Q8TDH9 187 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 BPIFB1Q8TDL5 484 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 MYLPFQ96A32 169 aa10.97□□□□□ -0.65
CCDC40-203ENST00000374877 ALPK1Q96QP1 1244 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms