RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 ADH1CP00326 375 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SERPINE1P05121 402 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CHRM5P08912 532 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PRDX6P30041 224 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 NR4A2P43354 598 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CDKN1CP49918 316 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 NR1H2P55055 460 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF33AQ06730 810 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CHAF1BQ13112 559 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CCNIQ14094 377 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 DUSP28Q4G0W2 176 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 IQCCQ4KMZ1 466 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SPANXN3Q5MJ09 141 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 THEM4Q5T1C6 240 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TEDDM1Q5T9Z0 273 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PIK3R6Q5UE93 754 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ADGRF2Q8IZF7 708 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 LIX1Q8N485 282 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 GPRC5AQ8NFJ5 357 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 GDPD5Q8WTR4 605 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 NTAN1Q96AB6 310 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 MROQ9BYG7 248 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CDH22Q9UJ99 828 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CEPT1Q9Y6K0 416 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 MAN1A2O60476 641 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 GPR32O75388 356 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TRIM16O95361 564 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 METTL18O95568 372 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CLUP10909 449 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 FGF3P11487 239 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PDHA2P29803 388 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ARL4AP40617 200 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ALDH6A1Q02252 535 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ORC1Q13415 861 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TOP3AQ13472 1001 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SNAPC2Q13487 334 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PDK1Q15118 436 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CA9Q16790 459 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SOWAHAQ2M3V2 549 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 MMEL1Q495T6 779 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 GTDC1Q4AE62 458 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SFT2D3Q587I9 215 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 KCNT2Q6UVM3 1135 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 UTS2BQ765I0 119 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SNX31Q8N9S9 440 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 LEMD2Q8NC56 503 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TUBGCP3Q96CW5 907 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PGAP3Q96FM1 320 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF778Q96MU6 729 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SNX18Q96RF0 628 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 BARD1Q99728 777 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CCM2Q9BSQ5 444 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TDRD1Q9BXT4 1180 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 PDGFCQ9NRA1 345 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 IPO11Q9UI26 975 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 RUVBL1Q9Y265 456 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 WBP11Q9Y2W2 641 aaKnown RBP8.16□□□□□ -1.1
GARNL3-201ENST00000373386 ACOT9Q9Y305 439 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 CSNK1G3Q9Y6M4 447 aa8.16□□□□□ -1.1
GARNL3-201ENST00000373386 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 ASNA1O43681 348 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 CIDEAO60543 219 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 GMDSO60547 372 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 SLITRK5O94991 958 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 GSRP00390 522 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 MMP3P08254 477 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 SLC15A1P46059 708 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 EPHB1P54762 984 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 AQP4P55087 323 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 DSC2Q02487 901 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 SLC10A2Q12908 348 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-201ENST00000373386 PRKG2Q13237 762 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 SV2CQ496J9 727 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 CDKL4Q5MAI5 379 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 FBXO47Q5MNV8 452 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 N4BP2L1Q5TBK1 243 aaPredicted RBP8.15□□□□□ -1.1
GARNL3-201ENST00000373386 PRMT9Q6P2P2 845 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 CASC4Q6P4E1 433 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 METTL25Q8N6Q8 603 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 ZNF321PQ8N8H1 164 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 PIK3R3Q92569 461 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 RMND5AQ9H871 391 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 NME7Q9Y5B8 376 aa8.15□□□□□ -1.1
GARNL3-201ENST00000373386 A0A1W2PRG6 482 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 FAM221AA4D161 298 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 J3KRW8 73 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 ERVH48-1M5A8F1 160 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 FZD6O60353 706 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 PLIN3O60664 434 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 GSTM5P46439 218 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 PRKAA2P54646 552 aa8.15□□□□□ -1.11
GARNL3-201ENST00000373386 CASP9P55211 416 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms