RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SPENQ96T58 3664 aaKnown RBP18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 A0A0U1RQJ8 604 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 TJP3O95049 919 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 CLDN7O95471 211 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 ASMTLO95671 621 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 EML2O95834 649 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 DLGAP3O95886 979 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 FTCDO95954 541 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 MT-CYBP00156 380 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 NFKB1P19838 968 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 OTUD4Q01804 1114 aaKnown RBP18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 CDK18Q07002 472 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 MAP7Q14244 749 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 RFLNAQ6ZTI6 216 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 TRIM74Q86UV6 250 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 NLRP8Q86W28 1048 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 CDKL3Q8IVW4 592 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 SCAMP4Q969E2 229 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 TADA1Q96BN2 335 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 TRIB3Q96RU7 358 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 KLHL3Q9UH77 587 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 ZNHIT2Q9UHR6 403 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 RPS6KL1Q9Y6S9 549 aa18.93■□□□□ 0.62
TRAPPC3-204ENST00000373166 KRT86O43790 486 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 PMPCBO75439 489 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 MAPK9P45984 424 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 EPHA4P54764 986 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 MLLT10P55197 1068 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 TCTN3Q6NUS6 607 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 IYDQ6PHW0 289 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 PID1Q7Z2X4 250 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 SLC9B2Q86UD5 537 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 ZNF567Q8N184 647 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 RNF10Q8N5U6 811 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 ACTL9Q8TC94 416 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 HERPUD2Q9BSE4 406 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 EPB41L1Q9H4G0 881 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 FAM153AQ9UHL3 310 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 RSPH14Q9UHP6 348 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 TRHDEQ9UKU6 1024 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 PACSIN2Q9UNF0 486 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 ADGRG1Q9Y653 693 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 MRPS18BQ9Y676 258 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 CAPN6Q9Y6Q1 641 aa18.92■□□□□ 0.62
TRAPPC3-204ENST00000373166 GOLGA6L9A6NEM1 432 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 STK10O94804 968 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 NDST3O95803 873 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 SLC4A1P02730 911 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 PYGMP11217 842 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 SLC2A4P14672 509 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 CD68P34810 354 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 DLSTP36957 453 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 EIF3EP60228 445 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 ASB18Q6ZVZ8 466 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 CHST15Q7LFX5 561 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 LYSMD3Q7Z3D4 306 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 PLXDC1Q8IUK5 500 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 COX14Q96I36 57 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 SRPK1Q96SB4 655 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 RIOK2Q9BVS4 552 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 ULBP3Q9BZM4 244 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 PRDM8Q9NQV8 689 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 UBP1Q9NZI7 540 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 TBC1D29Q9UFV1 150 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 ZNF711Q9Y462 761 aa18.91■□□□□ 0.62
TRAPPC3-204ENST00000373166 RGSL1A5PLK6 1076 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 INPP4BO15327 924 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 NRDCO43847 1150 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 ZNF189O75820 626 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 NR1D1P20393 614 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 F8A1P23610 371 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 RBL1P28749 1068 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 SPINT3P49223 89 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 ITPRIPL1Q6GPH6 555 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 AADACL2Q6P093 401 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 C6orf15Q6UXA7 325 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 FCRL5Q96RD9 977 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 FAM83DQ9H4H8 585 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 ZFYVE1Q9HBF4 777 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 MAGEE1Q9HCI5 957 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 VPS18Q9P253 973 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 GUCA1BQ9UMX6 200 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 POLHQ9Y253 713 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 PRKAB1Q9Y478 270 aa18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 USP9XQ93008 2570 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-204ENST00000373166 NOTCH2Q04721 2471 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 KIR2DS5A0A0G2JLQ3 304 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 A0A0G2JNG1 304 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 F5H423 210 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 K7EM74 188 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 KIR2DS3K7RE56 304 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 DDX3YO15523 660 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 VPS4BO75351 444 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 ANKRD34CP0C6C1 535 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 PIRTP0C851 137 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 RBP3P10745 1247 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 WNT3AP56704 352 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 FOXM1Q08050 763 aa18.89■□□□□ 0.61
TRAPPC3-204ENST00000373166 ERV3-1Q14264 604 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms