RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 HMG20AQ9NP66 347 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 AIG1Q9NVV5 245 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 LEF1Q9UJU2 399 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 IKZF3Q9UKT9 509 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 FAM50BQ9Y247 325 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 EEDO75530 441 aaKnown RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CAPN15O75808 1086 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 ZNF37AP17032 561 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 PRKACGP22612 351 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 EEFSECP57772 596 aaKnown RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CACNB2Q08289 660 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CD47Q08722 323 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SLC10A7Q0GE19 358 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 LCP2Q13094 533 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SEMA3AQ14563 771 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CBX2Q14781 532 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-202ENST00000372748 UPP1Q16831 310 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 COQ5Q5HYK3 327 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 UGT3A1Q6NUS8 523 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 TTC16Q8NEE8 873 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 OR10T2Q8NGX3 314 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 OR2T11Q8NH01 316 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 FBXO30Q8TB52 745 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 ITCHQ96J02 903 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SLX1AQ9BQ83 275 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 MUC13Q9H3R2 512 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 CSNK1G1Q9HCP0 422 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 FAM118AQ9NWS6 357 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SUN2Q9UH99 717 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 SLC45A1Q9Y2W3 748 aa14.66□□□□□ -0.06
COL9A2-202ENST00000372748 G3V2T6 193 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 J3KR12 359 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 M0QZ92 97 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 CDH1P12830 882 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 MRPS6P82932 125 aaKnown RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 CARTPTQ16568 116 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 CTF1Q16619 201 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 PAGE2BQ5JRK9 111 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 GABPB2Q8TAK5 448 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 ATOH8Q96SQ7 321 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 LRRC3Q9BY71 257 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 RMI1Q9H9A7 625 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 PAK1IP1Q9NWT1 392 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 DNMT3BQ9UBC3 853 aaKnown RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 SLC7A4O43246 635 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 SLC2A3P11169 496 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 FDXRP22570 491 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 HTR1EP28566 365 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 GP2P55259 537 aaKnown RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 PURAQ00577 322 aaKnown RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 FPGSQ05932 587 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 ENPP6Q6UWR7 440 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 FBXO39Q8N4B4 442 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 FNDC5Q8NAU1 212 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 NDNFQ8TB73 568 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 FIG4Q92562 907 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 MAGED4Q96JG8 741 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 ASB2Q96Q27 587 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 ATP13A3Q9H7F0 1226 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 AGO3Q9H9G7 860 aaKnown RBP14.65□□□□□ -0.06
COL9A2-202ENST00000372748 AASSQ9UDR5 926 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 ARL5AQ9Y689 179 aa14.65□□□□□ -0.06
COL9A2-202ENST00000372748 C16orf96A6NNT2 1141 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ZBBXA8MT70 800 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 IRAK2O43187 625 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 XPNPEP2O43895 674 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ITGB1P05556 798 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 OR4Q2P0C623 313 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 INAVAQ3KP66 663 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 RBM48Q5RL73 367 aaKnown RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 LAIR2Q6ISS4 152 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 SYVN1Q86TM6 617 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 PROSER1Q86XN7 944 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 PROKR1Q8TCW9 393 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 BLOC1S5Q8TDH9 187 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 CDK15Q96Q40 435 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 MBOAT4Q96T53 435 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 MFSD1Q9H3U5 465 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 AKIP1Q9NQ31 210 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ENPP5Q9UJA9 477 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ZNF225Q9UK10 706 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 RNF112Q9ULX5 631 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 SNX5Q9Y5X3 404 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 UBA6A0AVT1 1052 aaPredicted RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 SNX2O60749 519 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ZNF24P17028 368 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 ZNF135P52742 658 aaPredicted RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 DGKQP52824 942 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 EMX2Q04743 252 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 CHRNB3Q05901 458 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 KCNAB2Q13303 367 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 TSNQ15631 228 aaKnown RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 FAM98BQ52LJ0 330 aaKnown RBP14.64□□□□□ -0.07
COL9A2-202ENST00000372748 SIRPB2Q5JXA9 342 aa14.64□□□□□ -0.07
COL9A2-202ENST00000372748 TMEM236Q5W0B7 351 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms