RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 BIKQ13323 160 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 FBXO43Q4G163 708 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 XRRA1Q6P2D8 792 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 CFAP206Q8IYR0 622 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 EFHBQ8N7U6 833 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 OR10Z1Q8NGY1 313 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 SLC35C1Q96A29 364 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 MUS81Q96NY9 551 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 CPNE1Q99829 537 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
PRDM1-201ENST00000369089 REEP1Q9H902 201 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 FOLH1BQ9HBA9 442 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 NKIRAS2Q9NYR9 191 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 POLG2Q9UHN1 485 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 PCDHB12Q9Y5F1 795 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 PPP2R3BQ9Y5P8 575 aa10.34□□□□□ -0.75
PRDM1-201ENST00000369089 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 E9PI62 339 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MT-ND1P03886 318 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PTPN1P18031 435 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 AKT1P31749 480 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 JAK3P52333 1124 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 TSPAN5P62079 268 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 COL28A1Q2UY09 1125 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 OR4D10Q8NGI6 311 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 COQ10AQ96MF6 247 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ACP6Q9NPH0 428 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RASSF1Q9NS23 344 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PCDHGA7Q9Y5G6 932 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MYH7BA7E2Y1 1941 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SCO2O43819 266 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CSTF2P33240 577 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 KCNJ5P48544 419 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ABRQ12979 859 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PRSS42Q7Z5A4 293 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 YIPF7Q8N8F6 280 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MAFIPQ8WZ33 124 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 TFAP2CQ92754 450 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SEMA4DQ92854 862 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CNPPD1Q9BV87 410 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 TTLL2Q9BWV7 592 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 FNIP2Q9P278 1114 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PCDHGB4Q9UN71 923 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CHADO15335 359 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MID1O15344 667 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RP2O75695 350 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CLTBP09497 229 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 GLULP15104 373 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 IDUAP35475 653 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 TKTL1P51854 596 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 POU4F1Q01851 419 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SLC3A1Q07837 685 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ILF3Q12906 894 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 C6orf141Q5SZD1 244 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MOB2Q70IA6 237 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ZNF720Q7Z2F6 126 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CYP4Z2PQ8N1L4 340 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SYNPOQ8N3V7 929 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 DPYSL5Q9BPU6 564 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SEC22CQ9BRL7 303 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RBM38Q9H0Z9 239 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SNTG1Q9NSN8 517 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CMTM6Q9NX76 183 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RPH3AQ9Y2J0 694 aaPredicted RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CORINQ9Y5Q5 1042 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 PER2O15055 1255 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 BET1O15155 118 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SHOXO15266 292 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 MSH4O15457 936 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 HTR3BO95264 441 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 IL1BP01584 269 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RPL22P35268 128 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 FAM180BQ6P0A1 224 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 SLC22A9Q8IVM8 553 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 TFB1MQ8WVM0 346 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 BIRC7Q96CA5 298 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 AURKBQ96GD4 344 aaPredicted RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
PRDM1-201ENST00000369089 CHIAQ9BZP6 476 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 EPB41L4BQ9H329 900 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 NANOGQ9H9S0 305 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 ZNF225Q9UK10 706 aa10.33□□□□□ -0.76
PRDM1-201ENST00000369089 AP3D1O14617 1153 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ZNF780AO75290 641 aaPredicted RBP10.32□□□□□ -0.76
PRDM1-201ENST00000369089 LRIG2O94898 1065 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 RASAL1O95294 804 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 ERVK-10P10266 1014 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 CYP2C8P10632 490 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MPSTP25325 297 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 RAPSNQ13702 412 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 MEP1AQ16819 746 aa10.32□□□□□ -0.76
PRDM1-201ENST00000369089 PIK3R6Q5UE93 754 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms