RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TACR2P21452 398 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 DRD4P21917 467 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SPAM1P38567 509 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 AHSA2Q719I0 299 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 AUTS2Q8WXX7 1259 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 CCDC115Q96NT0 180 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 CSPG4P5Q96PW8 444 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 DEC1Q9P2X7 70 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 RAB21Q9UL25 225 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 BCKDKO14874 412 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SNAP91O60641 907 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 SERPINA3P01011 423 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 TGFBR2P37173 567 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 BNIP2Q12982 314 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 VITQ6UXI7 678 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 AP3S1Q92572 193 aa18.01■□□□□ 0.47
SNX27-202ENST00000368841 CFAP20Q9Y6A4 193 aaKnown RBP18.01■□□□□ 0.47
SNX27-202ENST00000368841 TIE1P35590 1138 aa18■□□□□ 0.47
SNX27-202ENST00000368841 DCTN2Q13561 401 aaKnown RBP18■□□□□ 0.47
SNX27-202ENST00000368841 ZNF615Q8N8J6 731 aa18■□□□□ 0.47
SNX27-202ENST00000368841 ZNF557Q8N988 423 aaPredicted RBP18■□□□□ 0.47
SNX27-202ENST00000368841 GAL3ST3Q96A11 431 aa18■□□□□ 0.47
SNX27-202ENST00000368841 IPPKQ9H8X2 491 aa18■□□□□ 0.47
SNX27-202ENST00000368841 ELOVL2Q9NXB9 296 aa18■□□□□ 0.47
SNX27-202ENST00000368841 SLC17A6Q9P2U8 582 aa18■□□□□ 0.47
SNX27-202ENST00000368841 AP2S1P53680 142 aaPredicted RBP18■□□□□ 0.47
SNX27-202ENST00000368841 MAPK12P53778 367 aa18■□□□□ 0.47
SNX27-202ENST00000368841 UBXN11Q5T124 520 aa18■□□□□ 0.47
SNX27-202ENST00000368841 PPTC7Q8NI37 304 aa18■□□□□ 0.47
SNX27-202ENST00000368841 TBATAQ96M53 351 aa18■□□□□ 0.47
SNX27-202ENST00000368841 TMEM27Q9HBJ8 222 aa18■□□□□ 0.47
SNX27-202ENST00000368841 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
SNX27-202ENST00000368841 OR7A10O76100 309 aa18■□□□□ 0.47
SNX27-202ENST00000368841 ANXA4P09525 319 aaPredicted RBP18■□□□□ 0.47
SNX27-202ENST00000368841 ARMC10Q8N2F6 343 aa18■□□□□ 0.47
SNX27-202ENST00000368841 TRMT61BQ9BVS5 477 aaKnown RBP18■□□□□ 0.47
SNX27-202ENST00000368841 BRD7Q9NPI1 651 aa18■□□□□ 0.47
SNX27-202ENST00000368841 FAM86C2PA6NEL3 165 aa18■□□□□ 0.47
SNX27-202ENST00000368841 SPDYCQ5MJ68 293 aa18■□□□□ 0.47
SNX27-202ENST00000368841 OGFOD2Q6N063 350 aa18■□□□□ 0.47
SNX27-202ENST00000368841 EIF1ADQ8N9N8 165 aaKnown RBP18■□□□□ 0.47
SNX27-202ENST00000368841 SLC38A3Q99624 504 aa18■□□□□ 0.47
SNX27-202ENST00000368841 CLK4Q9HAZ1 481 aaKnown RBP18■□□□□ 0.47
SNX27-202ENST00000368841 PHPT1Q9NRX4 125 aaPredicted RBP18■□□□□ 0.47
SNX27-202ENST00000368841 DNAJC11Q9NVH1 559 aa18■□□□□ 0.47
SNX27-202ENST00000368841 COLEC10Q9Y6Z7 277 aa18■□□□□ 0.47
SNX27-202ENST00000368841 KLRC4O43908 158 aa18■□□□□ 0.47
SNX27-202ENST00000368841 ITGB5P18084 799 aa18■□□□□ 0.47
SNX27-202ENST00000368841 IL23RQ5VWK5 629 aa18■□□□□ 0.47
SNX27-202ENST00000368841 TMEM220Q6QAJ8 160 aa18■□□□□ 0.47
SNX27-202ENST00000368841 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
SNX27-202ENST00000368841 POF1BQ8WVV4 589 aa18■□□□□ 0.47
SNX27-202ENST00000368841 IFT46Q9NQC8 304 aa18■□□□□ 0.47
SNX27-202ENST00000368841 EIF2B4Q9UI10 523 aaKnown RBP18■□□□□ 0.47
SNX27-202ENST00000368841 PADI3Q9ULW8 664 aa18■□□□□ 0.47
SNX27-202ENST00000368841 AP3M1Q9Y2T2 418 aa18■□□□□ 0.47
SNX27-202ENST00000368841 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 MSCO60682 206 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 ALOX5P09917 674 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 AVPR1BP47901 424 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 RNF144AP50876 292 aaPredicted RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 CLEC4CQ8WTT0 213 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SLC25A36Q96CQ1 311 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 MRTO4Q9UKD2 239 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 IRAK3Q9Y616 596 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 PLIN3O60664 434 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 S100A9P06702 114 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 CDK9P50750 372 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 GBE1Q04446 702 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 PTF1AQ7RTS3 328 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 GIPC3Q8TF64 312 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 RIPOR3Q96MK2 946 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 KHNYNO15037 678 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 CDH12P55289 794 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 ARF3P61204 181 aaPredicted RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 ARF1P84077 181 aaKnown RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 NFATC2Q13469 925 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 C5orf22Q49AR2 442 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
SNX27-202ENST00000368841 HDDC3Q8N4P3 179 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 PHF12Q96QT6 1004 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 B4DGG1 531 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 H7C0S8 307 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 CMPK1P30085 196 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 VLDLRP98155 873 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 IQCHQ86VS3 1027 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 MON1AQ86VX9 555 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 LRRC19Q9H756 370 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 ERVK-11Q9UQG0 969 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 CCDC162PA2VCL2 907 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 UROSP10746 265 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SYN1P17600 705 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 ACADLP28330 430 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 PPM1AP35813 382 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
SNX27-202ENST00000368841 SERPINA9Q86WD7 417 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms