RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LAMP2P13473 410 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 JUPP14923 745 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 CHMLP26374 656 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PTBP1P26599 531 aaKnown RBP eCLIP5.09□□□□□ -1.595e-10■■■■□ 20.2
ECHDC1-204ENST00000368292 GABRB3P28472 473 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PSMC2P35998 433 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TRIM23P36406 574 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 NUP62P37198 522 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PRRX1P54821 245 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MYL6P60660 151 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MXRA7P84157 204 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 DNAJC3Q13217 504 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 RCN2Q14257 317 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 VEPH1Q14D04 833 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PDK1Q15118 436 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM160B1Q5W0V3 765 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TRAT1Q6PIZ9 186 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PXKQ7Z7A4 578 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 ARMC8Q8IUR7 673 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 ITPRIPQ8IWB1 547 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 RHOT2Q8IXI1 618 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TDRD5Q8NAT2 981 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 CDC26Q8NHZ8 85 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 CYP2W1Q8TAV3 490 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TRPC4APQ8TEL6 797 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 AFG1LQ8WV93 481 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PRCCQ92733 491 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 HAS1Q92839 578 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PEX13Q92968 403 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM149B1Q96BN6 582 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MRPL38Q96DV4 380 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 KTI12Q96EK9 354 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 RNF125Q96EQ8 232 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 DTNBP1Q96EV8 351 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PGAP3Q96FM1 320 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 LRRC46Q96FV0 321 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 NLRP4Q96MN2 994 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PKP4Q99569 1192 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 EIF3CQ99613 913 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TRIM62Q9BVG3 475 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 NUP85Q9BW27 656 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 NUSAP1Q9BXS6 441 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TEX12Q9BXU0 123 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 CRNKL1Q9BZJ0 848 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MS4A7Q9GZW8 240 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TMPRSS5Q9H3S3 457 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MRPL44Q9H9J2 332 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 LY9Q9HBG7 655 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 EHD2Q9NZN4 543 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 HESX1Q9UBX0 185 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNF212Q9UDV6 495 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 BAIAP2L1Q9UHR4 511 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 MID2Q9UJV3 735 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 TBX20Q9UMR3 447 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 PSAT1Q9Y617 370 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 HS3ST4Q9Y661 456 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 POMT1Q9Y6A1 747 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 CLCA3PQ9Y6N3 262 aa5.09□□□□□ -1.59
ECHDC1-204ENST00000368292 GRIN2DO15399 1336 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 USP9XQ93008 2570 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 SYCE3A1L190 88 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 FAM234BA2RU67 622 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 LINC01553A4QN01 128 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 MARCH11A6NNE9 402 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 H3BNC9 293 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 MYO1CO00159 1063 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 RNASET2O00584 256 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 HNRNPDLO14979 420 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ATP2A1O14983 1001 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 DCLK1O15075 740 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 CYTH3O43739 400 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 STRNO43815 780 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 GMFGO60234 142 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ACSL4O60488 711 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 FAM155BO75949 473 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 CSF1RP07333 972 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ELANEP08246 267 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 INHBAP08476 426 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 CDK4P11802 303 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 CASTP20810 708 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 GCSHP23434 173 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 MCM3P25205 808 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 IL1R2P27930 398 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ABCD3P28288 659 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 AXLP30530 894 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 GRK5P34947 590 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 RFC2P35250 354 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 TAGLN2P37802 199 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 POLE2P56282 527 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 UBE2IP63279 158 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 DMWDQ09019 674 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ASPHQ12797 758 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 LMAN2Q12907 356 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 KLF10Q13118 480 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 ZRSR1Q15695 479 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 TBCEQ15813 527 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 TYSND1Q2T9J0 566 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 BEAN1Q3B7T3 259 aa5.08□□□□□ -1.6
ECHDC1-204ENST00000368292 FSCBQ5H9T9 825 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms