RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 IGFALSP35858 605 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 DRG2P55039 364 aaKnown RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 COL9A2Q14055 689 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 PDK3Q15120 406 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 TSTD2Q5T7W7 516 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ZDHHC20Q5W0Z9 365 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 FSTL4Q6MZW2 842 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 CDK15Q96Q40 435 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 C11orf84Q9BUA3 381 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 CNPPD1Q9BV87 410 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MAGEH1Q9H213 219 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 UGT1A6P19224 532 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 UGT1A1P22309 533 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 UGT1A4P22310 534 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 CMPK1P30085 196 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 UGT1A3P35503 534 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 UGT1A5P35504 534 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MASP1P48740 699 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 CHN2P52757 468 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 KRR1Q13601 381 aaKnown RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 NEK7Q8TDX7 302 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ART5Q96L15 291 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ALG2Q9H553 416 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 RNPEPL1Q9HAU8 725 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 GSTK1Q9Y2Q3 226 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 SH3GLB1Q9Y371 365 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF536O15090 1300 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ZBTB6Q15916 424 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MPP5Q8N3R9 675 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MREGQ8N565 214 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 FZD8Q9H461 694 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 SEMA3GQ9NS98 782 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 AP3M1Q9Y2T2 418 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 EDF1O60869 148 aaKnown RBP12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MAPK12P53778 367 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ITGADQ13349 1161 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 SLC25A24Q6NUK1 477 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 ZNF730Q6ZMV8 503 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 HEXDCQ8WVB3 486 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 SRMSQ9H3Y6 488 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 NR2E1Q9Y466 385 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 B4DGG1 531 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 MAPKAPK2P49137 400 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 FCRL4Q96PJ5 515 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 KIFC1Q9BW19 673 aa12.78□□□□□ -0.36
PTPRK-207ENST00000368226 NCK1P16333 377 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-207ENST00000368226 KLF1Q13351 362 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-207ENST00000368226 NR1D2Q14995 579 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 ARL13AQ5H913 290 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-207ENST00000368226 MED27Q6P2C8 311 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 HFE2Q6ZVN8 426 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 ADGRG6Q86SQ4 1221 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 C3orf18Q9UK00 162 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.36
PTPRK-207ENST00000368226 H3BNH8 94 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 LIN7AO14910 233 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-207ENST00000368226 FADS2O95864 444 aaKnown RBP12.77□□□□□ -0.37
PTPRK-207ENST00000368226 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-207ENST00000368226 MTHFRP42898 656 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 SLC1A2P43004 574 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 NDST2P52849 883 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 PCDH1Q08174 1060 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 AKIRIN2Q53H80 203 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ENPP7Q6UWV6 458 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ZNF781Q8N8C0 355 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 OSBPL2Q9H1P3 480 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 CMTM6Q9NX76 183 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 COL6A1P12109 1028 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 GRM2Q14416 872 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 PYDC2Q56P42 97 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ABRAXAS1Q6UWZ7 409 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 GHDCQ8N2G8 530 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
PTPRK-207ENST00000368226 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
PTPRK-207ENST00000368226 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 PDE9AO76083 593 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ACP5P13686 325 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 KIR3DL1P43629 444 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 KCNQ1P51787 676 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 BNIP2Q12982 314 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 UBR7Q8N806 425 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 SMPDL3BQ92485 455 aa12.77□□□□□ -0.37
PTPRK-207ENST00000368226 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms