RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 PTRH1Q86Y79 214 aaKnown RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 PGBD5Q8N414 524 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 BPIFB1Q8TDL5 484 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 SH3YL1Q96HL8 342 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 CYP2S1Q96SQ9 504 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 ZNF236Q9UL36 1845 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 HTR3EA5X5Y0 456 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 OR4F21O95013 312 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 GLP2RO95838 553 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 ALDH2P05091 517 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 HTR6P50406 440 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 ALDH3A2P51648 485 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 NFKB2Q00653 900 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 CD47Q08722 323 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 ZNF362Q5T0B9 420 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 TMEM236Q5W0B7 351 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 C8orf59Q8N0T1 100 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 CADM3Q8N126 398 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 PROKR1Q8TCW9 393 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 FRS2Q8WU20 508 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 HPS1Q92902 700 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 NRBF2Q96F24 287 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 ALOXE3Q9BYJ1 711 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 PAK1IP1Q9NWT1 392 aaPredicted RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 HACD3Q9P035 362 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 EIF2B4Q9UI10 523 aaKnown RBP13.45□□□□□ -0.26
PRKN-205ENST00000366897 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 WDR37Q9Y2I8 494 aa13.45□□□□□ -0.26
PRKN-205ENST00000366897 RALGAPA2Q2PPJ7 1873 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 BTN3A1O00481 513 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 CXCL11O14625 94 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 GSTT2P0CG29 244 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 GSTT2BP0CG30 244 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 PIK3R6Q5UE93 754 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 DPP9Q86TI2 863 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 RIMKLAQ8IXN7 391 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 COLGALT2Q8IYK4 626 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 PAPD5Q8NDF8 572 aaKnown RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 CHDHQ8NE62 594 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 GABPB2Q8TAK5 448 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 CNIH3Q8TBE1 160 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 FKBP10Q96AY3 582 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 HGH1Q9BTY7 390 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 EPS8L2Q9H6S3 715 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 SP110Q9HB58 689 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRKN-205ENST00000366897 VPS51Q9UID3 782 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 ZNF639Q9UID6 485 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 LEF1Q9UJU2 399 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 MROH6A6NGR9 719 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 DEAF1O75398 565 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 EEDO75530 441 aaKnown RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 TGFBR1P36897 503 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 LHX1P48742 406 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 KCNAB2Q13303 367 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 DGCR6Q14129 220 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 ANKS6Q68DC2 871 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 LAIR2Q6ISS4 152 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 TIGD7Q6NT04 549 aaPredicted RBP13.44□□□□□ -0.26
PRKN-205ENST00000366897 SLCO6A1Q86UG4 719 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 TUBA1CQ9BQE3 449 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 RHNO1Q9BSD3 238 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 CCDC68Q9H2F9 335 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 PRDM8Q9NQV8 689 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
PRKN-205ENST00000366897 TTC36A6NLP5 189 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 G3V2T6 193 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 MUSKO15146 869 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 DFNA5O60443 496 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 ESRRBO95718 433 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 ATXN1LP0C7T5 689 aaKnown RBP13.43□□□□□ -0.26
PRKN-205ENST00000366897 C7P10643 843 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 PIK3CGP48736 1102 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 IL1RL1Q01638 556 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 ZNF33AQ06730 810 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 AASDHQ4L235 1098 aaPredicted RBP13.43□□□□□ -0.26
PRKN-205ENST00000366897 C6orf141Q5SZD1 244 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 ZDHHC13Q8IUH4 622 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 CCDC117Q8IWD4 279 aaPredicted RBP13.43□□□□□ -0.26
PRKN-205ENST00000366897 SCN4BQ8IWT1 228 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 OR10T2Q8NGX3 314 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 NDNFQ8TB73 568 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 GPR21Q99679 349 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 SEMA3CQ99985 751 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 LRRC3Q9BY71 257 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 SARS2Q9NP81 518 aaKnown RBP13.43□□□□□ -0.26
PRKN-205ENST00000366897 OSER1Q9NX31 292 aa13.43□□□□□ -0.26
PRKN-205ENST00000366897 LIMD1Q9UGP4 676 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms