RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MFSD1Q9H3U5 465 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF214Q9UL59 606 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 LLGL2Q6P1M3 1020 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 AKAP14Q86UN6 197 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 PCDH12Q9NPG4 1184 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TEX264Q9Y6I9 313 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 FAM159BA6NKW6 160 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 PRAMEF1O95521 474 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 AP1S2P56377 157 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 LARS2Q15031 903 aaKnown RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC9A4Q6AI14 798 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TPGS1Q6ZTW0 290 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 HPS6Q86YV9 775 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMCO6Q96DC7 493 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 PCED1BQ96HM7 432 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF282Q9UDV7 671 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
CDC42BPA-203ENST00000366766 CAPN8A6NHC0 703 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CST3P01034 146 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ALDH4A1P30038 563 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CTSKP43235 329 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 PIK3R3Q92569 461 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMPRSS4Q9NRS4 437 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CMTM6Q9NX76 183 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 RUVBL1Q9Y265 456 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 HEBP2Q9Y5Z4 205 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 REM1O75628 298 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAB21L3Q8N8X9 362 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZNF248Q8NDW4 579 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 AHCYL2Q96HN2 611 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CADM1Q9BY67 442 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SGK2Q9HBY8 427 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 BTRCQ9Y297 605 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 LYVE1Q9Y5Y7 322 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC22A1O15245 554 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR10H2O60403 315 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ACSL4O60488 711 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 EEFSECP57772 596 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 HEPACAMQ14CZ8 416 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC10A6Q3KNW5 377 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 GPR107Q5VW38 600 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CBSLP0DN79 551 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 C7P10643 843 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CBSP35520 551 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SCN1BQ07699 218 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 REP15Q6BDI9 236 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CAPN10Q9HC96 672 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ATP6AP2A0A1C7CYW4 349 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 MATN2O00339 956 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ATP6AP2O75787 350 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 GLUD1P00367 558 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 SP100P23497 879 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 MVKQ03426 396 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 IZUMO1Q8IYV9 350 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 AP2M1Q96CW1 435 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CAMK1GQ96NX5 476 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 H3BM21 787 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TIPRLO75663 272 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZIK1Q3SY52 487 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TRPV1Q8NER1 839 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 COMMD9Q9P000 198 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CHPFQ8IZ52 775 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 NXNL1Q96CM4 212 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 NODALQ96S42 347 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TM6SF2Q9BZW4 377 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 VRTNQ9H8Y1 702 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMEM9Q9P0T7 183 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 ANGPTL1O95841 491 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 DHFRP00374 187 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 HKDC1Q2TB90 917 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 GJC2Q5T442 439 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 EHD1Q9H4M9 534 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 MKS1Q9NXB0 559 aa11.92□□□□□ -0.5
CDC42BPA-203ENST00000366766 GSSP48637 474 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 RPIAP49247 311 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 TYSND1Q2T9J0 566 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 VPS26BQ4G0F5 336 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 NFATC1O95644 943 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR1D2P34982 312 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 C9orf43Q8TAL5 461 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 PPM1MQ96MI6 270 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC29A3Q9BZD2 475 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 GPR25O00155 361 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 IMPDH1P20839 514 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAXP61244 160 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 TUBA4AP68366 448 aa11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 RBM48Q5RL73 367 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-203ENST00000366766 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms