RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MPP6Q9NZW5 540 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 SNX6Q9UNH7 406 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 MITFO75030 526 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 GGT5P36269 586 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ALDH3A2P51648 485 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 KPNA2P52292 529 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DPY19L1Q2PZI1 675 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ZNF789Q5FWF6 425 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 GPR158Q5T848 1215 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 STRADAQ7RTN6 431 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 PELI3Q8N2H9 469 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 MFSD4AQ8N468 514 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 NPWQ8N729 165 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 CHST13Q8NET6 341 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 DNERQ8NFT8 737 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ZUFSPQ96AP4 578 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 FAM118AQ9NWS6 357 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ERVK13-1Q9NX77 482 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 EHD3Q9NZN3 535 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 BTBD3Q9Y2F9 522 aa12.59□□□□□ -0.39
VAMP1-201ENST00000361716 WBP11Q9Y2W2 641 aaKnown RBP12.59□□□□□ -0.39
VAMP1-201ENST00000361716 ZFC3H1O60293 1989 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 C12orf71A8MTZ7 269 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SLC1A7O00341 560 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 AP2A1O95782 977 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CYBBP04839 570 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CPB1P15086 417 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 HTR2BP41595 481 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 KRT6CP48668 564 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FOXA1P55317 472 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TTC23LQ6PF05 361 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SLC26A9Q7LBE3 791 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 COLGALT2Q8IYK4 626 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 BLOC1S5Q8TDH9 187 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FAM162AQ96A26 154 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 NSUN5Q96P11 429 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 KCNS3Q9BQ31 491 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 GMIPQ9P107 970 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FAM50BQ9Y247 325 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 H3BRB1 525 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SLC22A1O15245 554 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 UPK1BO75841 260 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SCO1O75880 301 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 LCKP06239 509 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SLC1A2P43004 574 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SNRPD2P62316 118 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TP53BP2Q13625 1128 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 PTPRCAPQ14761 206 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FKBP1CQ5VVH2 108 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SIGIRRQ6IA17 410 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 RBM23Q86U06 439 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 PIM3Q86V86 326 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 DCP2Q8IU60 420 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 WNT8BQ93098 351 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 ROPN1LQ96C74 230 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 KLHL5Q96PQ7 755 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 UCKL1Q9NWZ5 548 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 STMN3Q9NZ72 180 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 UTS2RQ9UKP6 389 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FBXO5Q9UKT4 447 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 DOCK5Q9H7D0 1870 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 ZW10O43264 779 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CNTN5O94779 1100 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 HTR1AP08908 422 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CTSHP09668 335 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CYP2C8P10632 490 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 ADRA1BP35368 520 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 UBE3AQ05086 875 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SOWAHCQ53LP3 525 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 ARMC4Q5T2S8 1044 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 CYS1Q717R9 158 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 DPP9Q86TI2 863 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TRIM48Q8IWZ4 208 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 PTGR2Q8N8N7 351 aaPredicted RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 B3GALT6Q96L58 329 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SMOC2Q9H3U7 446 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 NT5MQ9NPB1 228 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
VAMP1-201ENST00000361716 SCN3BQ9NY72 215 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FZD10Q9ULW2 581 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 IPPQ9Y573 584 aa12.58□□□□□ -0.4
VAMP1-201ENST00000361716 FAM172BPA6NC97 362 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms