RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PBXIP1Q96AQ6 731 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 HSFY1Q96LI6 401 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 MEAF6Q9HAF1 191 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TMEM30AQ9NV96 361 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 RBM22Q9NW64 420 aaKnown RBP eCLIP9.03□□□□□ -0.969e-7■■■■■ 28.8
TOP1-201ENST00000361337 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 ANKRD6Q9Y2G4 727 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TMED5Q9Y3A6 229 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 PDZK1P1A8MUH7 402 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 ADAM12O43184 909 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 SNAP29O95721 258 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 CAPN3P20807 821 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 XPAP23025 273 aaPredicted RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 MYF6P23409 242 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 EPHB3P54753 998 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 SMAD3P84022 425 aaKnown RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 GSTM4Q03013 218 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TRAP1Q12931 704 aaKnown RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 SQLEQ14534 574 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 LRRC26Q2I0M4 334 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 SLC36A3Q495N2 470 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TXNDC8Q6A555 127 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 TBPL2Q6SJ96 375 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TAC4Q86UU9 113 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 UBE2J2Q8N2K1 259 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TTC30BQ8N4P2 665 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 KLHDC9Q8NEP7 349 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 NT5C3BQ969T7 300 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 PPP1R10Q96QC0 940 aaKnown RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 TCF25Q9BQ70 676 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 VPS45Q9NRW7 570 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 TBCCD1Q9NVR7 557 aa9.03□□□□□ -0.96
TOP1-201ENST00000361337 RCOR3Q9P2K3 495 aaPredicted RBP9.03□□□□□ -0.96
TOP1-201ENST00000361337 H0Y858 1186 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 H7C4K7 107 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 ALBP02768 609 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ELK4P28324 431 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 RPL34P49207 117 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 CXCR3P49682 368 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 FOXA1P55317 472 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 SAMD4BQ5PRF9 694 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 NEK5Q6P3R8 708 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 LINGO4Q6UY18 593 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PAQR9Q6ZVX9 377 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 DDX53Q86TM3 631 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 BLOC1S5Q8TDH9 187 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 SLC22A17Q8WUG5 538 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 SLC35B4Q969S0 331 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 NEURL2Q9BR09 285 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 TLR8Q9NR97 1041 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 CMTM6Q9NX76 183 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 SPG21Q9NZD8 308 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 EVLQ9UI08 416 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 MID2Q9UJV3 735 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 CDH7Q9ULB5 785 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 A0A1B0GTL3 188 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 DHRS12A0PJE2 317 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 FXYD1O00168 92 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 AXIN1O15169 862 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 NPHS1O60500 1241 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 CCNKO75909 580 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 MYOGP15173 224 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 KCNQ1P51787 676 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 GALNT2Q10471 571 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 CDH17Q12864 832 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 GRB7Q14451 532 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 FAM83EQ2M2I3 478 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 KIAA0319Q5VV43 1072 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 UBE2UQ5VVX9 321 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PIWIL4Q7Z3Z4 852 aaKnown RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PEX5LQ8IYB4 626 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ACDQ96AP0 544 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 TEKT5Q96M29 485 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 KCNA7Q96RP8 456 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ZDHHC4Q9NPG8 344 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ITGB1BP2Q9UKP3 347 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 MAGED1Q9Y5V3 778 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 FNDC1Q4ZHG4 1894 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 UBA6A0AVT1 1052 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 B4GALT3O60512 393 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PAGE1O75459 146 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 BAIAP3O94812 1187 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 KCNE1P15382 129 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 CCNA2P20248 432 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 ATP5F1P24539 256 aaPredicted RBP9.02□□□□□ -0.97
TOP1-201ENST00000361337 NPY2RP49146 381 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PHC1P78364 1004 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 SEMA3BQ13214 749 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 PCBP1Q15365 356 aaKnown RBP eCLIP9.02□□□□□ -0.979e-7■■□□□ 14
TOP1-201ENST00000361337 RABL3Q5HYI8 236 aa9.02□□□□□ -0.97
TOP1-201ENST00000361337 DENND5AQ6IQ26 1287 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms