RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 MAGEC1O60732 1142 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 CDK14O94921 469 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 KLHL2O95198 593 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 SOD1P00441 154 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 PDGFBP01127 241 aaPredicted RBP16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 MAGEA9P43362 315 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 CCR3P51677 355 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 SLC18A1P54219 525 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 GNGT1P63211 74 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 AGERQ15109 404 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 LRRC8EQ6NSJ5 796 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 TMEM220Q6QAJ8 160 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 KYAT3Q6YP21 454 aaKnown RBP16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 LCA5Q86VQ0 697 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 CPNE9Q8IYJ1 553 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 ZBTB2Q8N680 514 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 LKAAEAR1Q8TD35 194 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 INPP5DQ92835 1189 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 LINGO1Q96FE5 620 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 NMRAL1Q9HBL8 299 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 TMEM216Q9P0N5 145 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 GALPQ9UBC7 116 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 OR1A2Q9Y585 309 aa16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 OAS3Q9Y6K5 1087 aaKnown RBP16.4■□□□□ 0.22
SDCBP2-202ENST00000360779 FPGTO14772 594 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 APOA4P06727 396 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 ZNF37AP17032 561 aaPredicted RBP16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 AKT2P31751 481 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 RGS4P49798 205 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 IL2P60568 153 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 CDK3Q00526 305 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 BOP1Q14137 746 aaKnown RBP16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 KHDC1Q4VXA5 237 aaKnown RBP16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 KIAA0895LQ68EN5 471 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 CLEC14AQ86T13 490 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 SPNS2Q8IVW8 549 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 RASGEF1AQ8N9B8 481 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 CD200R1Q8TD46 325 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 ELMO1Q92556 727 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 SPACA7Q96KW9 195 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 C6orf106Q9H6K1 298 aaPredicted RBP16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 TRIM39Q9HCM9 518 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 MOSPD1Q9UJG1 213 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 MID2Q9UJV3 735 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 ADAM21Q9UKJ8 722 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 CNOT6Q9ULM6 557 aaKnown RBP16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 INVSQ9Y283 1065 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 TMEM98Q9Y2Y6 226 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 DHRS7Q9Y394 339 aa16.39■□□□□ 0.21
SDCBP2-202ENST00000360779 CACNB4O00305 520 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 RAD51BO15315 384 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 C7P10643 843 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 HNRNPA2B1P22626 353 aaKnown RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 IGFALSP35858 605 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 TIAL1Q01085 375 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 CRTC3Q6UUV7 619 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 NAPRTQ6XQN6 538 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 ADGRG6Q86SQ4 1221 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 CENPLQ8N0S6 344 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 BEND7Q8N7W2 519 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 PPP1R14CQ8TAE6 165 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 SKA2Q8WVK7 121 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 SREK1Q8WXA9 508 aaKnown RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 SLC30A3Q99726 388 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 C1QTNF1Q9BXJ1 281 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 WSB2Q9NYS7 404 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 CPSF2Q9P2I0 782 aaKnown RBP16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 ATXN10Q9UBB4 475 aa16.38■□□□□ 0.21
SDCBP2-202ENST00000360779 KPNA5O15131 536 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 AXIN1O15169 862 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 MAP3K13O43283 966 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 VEGFDO43915 354 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 PLIN3O60664 434 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 IGLV3-19P01714 112 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 RBP1P09455 135 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 TFEBP19484 476 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 CD9P21926 228 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 DGKAP23743 735 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 SLC26A3P40879 764 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 CLCN7P51798 805 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 CTSCP53634 463 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 WDR4P57081 412 aaKnown RBP16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 DLG1Q12959 904 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 TMEM207Q6UWW9 146 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 MYO1HQ8N1T3 1032 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 FAM160A2Q8N612 972 aaPredicted RBP16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 DENND6BQ8NEG7 585 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 DENND1AQ8TEH3 1009 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 ASB12Q8WXK4 309 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 EXT2Q93063 718 aa16.37■□□□□ 0.21
SDCBP2-202ENST00000360779 IGSF5Q9NSI5 407 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms