RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-201ENST00000360413 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 H3BRB1 525 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TFEBP19484 476 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 XKR6Q5GH73 641 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 NUP54Q7Z3B4 507 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ZFP3Q96NJ6 502 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ZDHHC6Q9H6R6 413 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TAS2R1Q9NYW7 299 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 MFSD10Q14728 455 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ABCA11PQ4W5N1 156 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 CEP68Q76N32 757 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 DRAXINQ8NBI3 349 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ARCN1P48444 511 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 GPR180Q86V85 440 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ECHDC2Q86YB7 292 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 PGAM4Q8N0Y7 254 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 KIAA0895Q8NCT3 520 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 OR5J2Q8NH18 312 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 CENPNQ96H22 339 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 PCDHB16Q9NRJ7 776 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 A0A1B0GVC2 190 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 CLPXO76031 633 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 AKR1A1P14550 325 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 GLYATQ6IB77 296 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 STRADAQ7RTN6 431 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 PSTKQ8IV42 348 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 SHOX2O60902 331 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC17A7Q9P2U7 560 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 MRPS17Q9Y2R5 130 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 GNG2P59768 71 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 USP30Q70CQ3 517 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 PAPSS2O95340 614 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ITPKBP27987 946 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 MIPP30301 263 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 LRRC70Q7Z2Q7 622 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ASB8Q9H765 288 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 SEC14L3Q9UDX4 400 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
SRGAP3-201ENST00000360413 ZC3H13Q5T200 1668 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 LIASO43766 372 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FABP3P05413 133 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 VWA5B1Q5TIE3 1220 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 GPR156Q8NFN8 814 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 NXPE2Q96DL1 559 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FAM234BA2RU67 622 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 KDELR1P24390 212 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 DOK6Q6PKX4 331 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 RALGPS2Q86X27 583 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 C4orf19Q8IY42 314 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 CLIP3Q96DZ5 547 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 TCF25Q9BQ70 676 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ENY2Q9NPA8 101 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FXYD6-FXYD2A0A087WZ82 144 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FOXO4P98177 505 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 PLEKHG6Q3KR16 790 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 HSDL1Q3SXM5 330 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 ADNP2Q6IQ32 1131 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FXYD6Q9H0Q3 95 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 GPSM3Q9Y4H4 160 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 AZIN1O14977 448 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 C17orf64Q86WR6 236 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 SPATA6LQ8N4H0 392 aa13.09□□□□□ -0.31
SRGAP3-201ENST00000360413 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms