RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TMEM248Q9NWD8 314 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF446Q9NWS9 450 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 IKZF3Q9UKT9 509 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 BTRCQ9Y297 605 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PCDHGC4Q9Y5F7 938 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 KDELR3O43731 214 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 KERAO60938 352 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NMBRP28336 390 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UGT1A5P35504 534 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CSKP41240 450 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UBAP2LQ14157 1087 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 C9orf64Q5T6V5 341 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TRIQKQ629K1 86 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ESRP1Q6NXG1 681 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SERINC5Q86VE9 423 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PYROXD2Q8N2H3 581 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NUS1Q96E22 293 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MFSD3Q96ES6 412 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NOL11Q9H8H0 719 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 USP29Q9HBJ7 922 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RUVBL1Q9Y265 456 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 FCF1Q9Y324 198 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 POLR3HQ9Y535 204 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UGT2B11O75310 529 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ERAL1O75616 437 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UBXN7O94888 489 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MT-CYBP00156 380 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 HNRNPA1P09651 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RPP38P78345 283 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SRSF11Q05519 484 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 C10orf62Q5T681 223 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SAPCD2Q86UD0 394 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 HDDC3Q8N4P3 179 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 OR2T12Q8NG77 320 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SPATA22Q8NHS9 363 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 AP3S1Q92572 193 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SLC47A1Q96FL8 570 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MECRQ9BV79 373 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MRPS26Q9BYN8 205 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CXorf56Q9H5V9 222 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CAB39LQ9H9S4 337 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TDP1Q9NUW8 608 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 GMPPBQ9Y5P6 360 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MPZL2O60487 215 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UGT2B17O75795 530 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 OR6B1O95007 311 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RASGRP1O95267 797 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 IGFALSP35858 605 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 AVPR1BP47901 424 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TRAF3Q13114 568 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NAE1Q13564 534 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TAB1Q15750 504 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SLC1A5Q15758 541 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 UPP1Q16831 310 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NCBP2-AS2Q69YL0 99 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 NIPAL1Q6NVV3 410 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM220Q6QAJ8 160 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PRR23BQ6ZRT6 265 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TAF8Q7Z7C8 310 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CMTR2Q8IYT2 770 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 OR2AP1Q8NGE2 309 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 LCN9Q8WX39 176 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PYDC1Q8WXC3 89 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CCM2Q9BSQ5 444 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 WRAP53Q9BUR4 548 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 HMG20AQ9NP66 347 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF282Q9UDV7 671 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 A0A1W2PRU2 124 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 FGF18O76093 207 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CHN2P52757 468 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SLC39A4Q6P5W5 647 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM192Q8IY95 271 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RNF148Q8N7C7 305 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 ST13P5Q8NFI4 369 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RCN3Q96D15 328 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SCLYQ96I15 445 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RAD9AQ99638 391 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 IFT80Q9P2H3 777 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SLC17A7Q9P2U7 560 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 INSL5Q9Y5Q6 135 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 RHPN2P1A8MT19 583 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 K7EPI3 171 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 KPNA4O00629 521 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MGRN1O60291 552 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 PLIN3O60664 434 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 SH3BGRLO75368 114 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 LDOC1O95751 146 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 AGR2O95994 175 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 GPIP06744 558 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 FEN1P39748 380 aaKnown RBP4.81□□□□□ -1.64
SCN3A-202ENST00000360093 MAPK12P53778 367 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 CDH13P55290 713 aa4.81□□□□□ -1.64
SCN3A-202ENST00000360093 TOMM20Q15388 145 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms