RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BEX2Q9BXY8 128 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CPNE5Q9HCH3 593 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GPN3Q9UHW5 284 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHGB6Q9Y5F9 930 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 XYLBO75191 536 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 BCAS1O75363 584 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ITGB3P05106 788 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 SPATA31D3P0C874 917 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CSH1P0DML2 217 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CSH2P0DML3 217 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PPIBP23284 216 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 STARD3Q14849 445 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PRR5LQ6MZQ0 368 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CDC42EP5Q6NZY7 148 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MPZL3Q6UWV2 235 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 SPATA31D4Q6ZUB0 917 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PIAS4Q8N2W9 510 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 DENND1AQ8TEH3 1009 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 KCTD15Q96SI1 283 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 HPF1Q9NWY4 346 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 U3KQV3 271 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NEO1Q92859 1461 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MAGEA12P43365 314 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GDF10P55107 478 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TDRD10Q5VZ19 366 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PNCKQ6P2M8 343 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ADGRD2Q7Z7M1 963 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 C4orf19Q8IY42 314 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 C9orf43Q8TAL5 461 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 STAG3L4Q8TBR4 150 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GANCQ8TET4 914 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 APOLD1Q96LR9 279 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 FUZQ9BT04 418 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 FUNDC2Q9BWH2 189 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZDHHC7Q9NXF8 308 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 SH3D21A4FU49 640 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TNFRSF11BO00300 401 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MYL3P08590 195 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ITGA3P26006 1051 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RENBPP51606 427 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 LRRC66Q68CR7 880 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CADM2Q8N3J6 435 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 FBXO27Q8NI29 283 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GATAD2BQ8WXI9 593 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 HSFY1Q96LI6 401 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF641Q96N77 438 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHAC1Q9H158 963 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 BIN3Q9NQY0 253 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TAS2R9Q9NYW1 312 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PCDHB8Q9UN66 801 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 OAS3Q9Y6K5 1087 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 AFDNP55196 1824 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PIP5K1BO14986 540 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ATP6AP2O75787 350 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CHRNA1P02708 482 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NCAM1P13591 858 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CIDECQ96AQ7 238 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TMIGD2Q96BF3 282 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 IRAK3Q9Y616 596 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 E9PAM4 449 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 INMT-MINDY4F8WBC2 141 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CLIC3O95833 236 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 BMXP51813 675 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 KCNA10Q16322 511 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 AP5M1Q9H0R1 490 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 EIF2B3Q9NR50 452 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RAB23Q9ULC3 237 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 A0A0X1KG70 313 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 COL6A1P12109 1028 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF81P51508 661 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NOMO3P69849 1222 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 NRG1Q02297 640 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TRMT10BQ6PF06 316 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ATXN3LQ9H3M9 355 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 FANCFQ9NPI8 374 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CPQQ9Y646 472 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RNASEH2AO75792 299 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GPC1P35052 558 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PPP4CP60510 307 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 C1QTNF12Q5T7M4 302 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 GMCL1P1Q8NEA9 526 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 PTCD2Q8WV60 388 aaKnown RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 UCK2Q9BZX2 261 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ADAM7Q9H2U9 754 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF395Q9H8N7 513 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 OPTCQ9UBM4 332 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ADAM15Q13444 863 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 SSX2Q16385 188 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 MSS51Q4VC12 460 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 C6orf141Q5SZD1 244 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 CPTPQ5TA50 214 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 DET1Q7L5Y6 550 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 TOMM5Q8N4H5 51 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 ANKFN1Q8N957 763 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 OR52K2Q8NGK3 314 aa6.02□□□□□ -1.45
VPS13B-203ENST00000358544 RANBP3Q9H6Z4 567 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-203ENST00000358544 HMBSP08397 361 aa6.01□□□□□ -1.45
VPS13B-203ENST00000358544 DLDP09622 509 aaKnown RBP6.01□□□□□ -1.45
VPS13B-203ENST00000358544 FDX1P10109 184 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms