RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 DNAAF5Q86Y56 855 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GPALPP1Q8IXQ4 340 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZSCAN4Q8NAM6 433 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MPP4Q96JB8 637 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MFSD14AQ96MC6 490 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF184Q99676 751 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ACAT2Q9BWD1 397 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 EPB41L1Q9H4G0 881 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MRPS30Q9NP92 439 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 CDC14AQ9UNH5 594 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 RAP2CQ9Y3L5 183 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 RAI2Q9Y5P3 530 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 C1RP00736 705 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SERPINA3P01011 423 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PTPN5P54829 565 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PKNOX1P55347 436 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GTF2BQ00403 316 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ABCA11PQ4W5N1 156 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ALG1LQ6GMV1 187 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MED27Q6P2C8 311 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 OTOP2Q7RTS6 562 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ADGRG6Q86SQ4 1221 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PHF13Q86YI8 300 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZCCHC10Q8TBK6 192 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 EXOSC8Q96B26 276 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 NUS1Q96E22 293 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MNTQ99583 582 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MRIQ9BWK5 157 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 IL17RBQ9NRM6 502 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MIOSQ9NXC5 875 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PCDHGC3Q9UN70 934 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PCDHGB1Q9Y5G3 927 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 FABP3P05413 133 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 TAF5Q15542 800 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 KCNA10Q16322 511 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SLC9B1Q4ZJI4 515 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 C12orf56Q8IXR9 622 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 OR6K2Q8NGY2 324 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SNX33Q8WV41 574 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 UPF1Q92900 1129 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 FAM83DQ9H4H8 585 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 FKBP14Q9NWM8 211 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 C19orf25Q9UFG5 118 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 FBXW2Q9UKT8 454 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MEMO1Q9Y316 297 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 RBM47A0AV96 593 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PEX12O00623 359 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MPZL2O60487 215 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SCGB2A1O75556 95 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 STBD1O95210 358 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MTHFD1P11586 935 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ABCG1P45844 678 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GDI2P50395 445 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MAPK12P53778 367 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 KCNJ2P63252 427 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 HSF2Q03933 536 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 LIPEQ05469 1076 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 TREML2Q5T2D2 321 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PIK3R6Q5UE93 754 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 BICRALQ6AI39 1079 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SLC30A6Q6NXT4 461 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 UNC5AQ6ZN44 842 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SPATA19Q7Z5L4 167 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 VANGL1Q8TAA9 524 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 KCTD4Q8WVF5 259 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF570Q96NI8 536 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 WRAP53Q9BUR4 548 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 TXLNGYQ9BZA5 131 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 TNKS2Q9H2K2 1166 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ADAM7Q9H2U9 754 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SERINC1Q9NRX5 453 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 RCOR3Q9P2K3 495 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 UPB1Q9UBR1 384 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GLS2Q9UI32 602 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 DKKL1Q9UK85 242 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 SPIN1Q9Y657 262 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 HYKKA2RU49 373 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 LOC110117498-PIK3R3F6TDL0 507 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MDM4O15151 490 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 OAS1P00973 400 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ZNF823P16415 610 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PCSK2P16519 638 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 HOXA10P31260 410 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MTTPP55157 894 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 FCHO2Q0JRZ9 810 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 DUSP4Q13115 394 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 UBXN11Q5T124 520 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 DENND5AQ6IQ26 1287 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 ARMCX6Q7L4S7 300 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GKN2Q86XP6 184 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PCDH20Q8N6Y1 951 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 RNF148Q8N7C7 305 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 PIK3R3Q92569 461 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MRPL45Q9BRJ2 306 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 GTPBP2Q9BX10 602 aaKnown RBP5.49□□□□□ -1.53
PTPRD-202ENST00000356435 STRADBQ9C0K7 418 aa5.49□□□□□ -1.53
PTPRD-202ENST00000356435 MOCS1Q9NZB8 636 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms