RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 YIPF7Q8N8F6 280 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 TSNARE1Q96NA8 513 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 RPRD1AQ96P16 312 aaPredicted RBP15.59■□□□□ 0.09
RTN3-205ENST00000356000 WACQ9BTA9 647 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 MEAF6Q9HAF1 191 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 IL1RL2Q9HB29 575 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 TMEM39AQ9NV64 488 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 EVA1BQ9NVM1 165 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 SLC23A1Q9UHI7 598 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 MAGED2Q9UNF1 606 aaPredicted RBP15.59■□□□□ 0.09
RTN3-205ENST00000356000 MINPP1Q9UNW1 487 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 LOXHD1Q8IVV2 1947 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 A0A0U1RQS6 177 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 E5RI56 91 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 FXYD1O00168 92 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 HLA-DRAP01903 254 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 HMGN1P05114 100 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 MLNP12872 115 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 SLC6A2P23975 617 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 RYKP34925 604 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 CRADDP78560 199 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 CDK5R2Q13319 367 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 ZMYND11Q15326 602 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 UGP2Q16851 508 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 ZNF691Q5VV52 312 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 ZBTB44Q8NCP5 570 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 JOSD2Q8TAC2 188 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 SLC6A17Q9H1V8 727 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 RSPH9Q9H1X1 276 aaPredicted RBP15.59■□□□□ 0.09
RTN3-205ENST00000356000 DUSP21Q9H596 190 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 ENOPH1Q9UHY7 261 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 LYVE1Q9Y5Y7 322 aa15.59■□□□□ 0.09
RTN3-205ENST00000356000 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 ERVK-10P10266 1014 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 HTR7P34969 479 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 ATP4BP51164 291 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 FCGRTP55899 365 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 MVKQ03426 396 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 KCNAB2Q13303 367 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 LAPTM5Q13571 262 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 TMEM81Q6P7N7 255 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 EMC1Q8N766 993 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 DNAJA4Q8WW22 397 aaPredicted RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 KLHL6Q8WZ60 621 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 CIDECQ96AQ7 238 aaPredicted RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 SEPHS2Q99611 448 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 CAB39LQ9H9S4 337 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 ARID2Q68CP9 1835 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 A0A1W2PRG6 482 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 NCAM2O15394 837 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 STX7O15400 261 aaKnown RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 ADAM11O75078 769 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 PTP4A3O75365 173 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 TRUB2O95900 331 aaKnown RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 ALPPP05187 535 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 CHRM3P20309 590 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 CD9P21926 228 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 BLVRAP53004 296 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 SLC35A2P78381 396 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 FRG1Q14331 258 aaKnown RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 TYW3Q6IPR3 259 aaKnown RBP15.58■□□□□ 0.08
RTN3-205ENST00000356000 SLAIN1Q8ND83 568 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 TNIP3Q96KP6 325 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 FAM8A1Q9UBU6 413 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 NDUFAF1Q9Y375 327 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 PCDHA9Q9Y5H5 950 aa15.58■□□□□ 0.08
RTN3-205ENST00000356000 UBXN8O00124 270 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 PRMT5O14744 637 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 NPHS1O60500 1241 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 RNGTTO60942 597 aaKnown RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 PGLSO95336 258 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 JUNDP17535 347 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 PTX3P26022 381 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 MIPP30301 263 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 CPT1AP50416 773 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 RGS1Q08116 209 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 DPP8Q6V1X1 898 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 GPAT4Q86UL3 456 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 OR52H1Q8NGJ2 320 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 SLC38A4Q969I6 547 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 CDCA5Q96FF9 252 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 ATXN7L3BQ96GX2 97 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 RNF145Q96MT1 663 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 GTPBP2Q9BX10 602 aaKnown RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 ZNF518BQ9C0D4 1074 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 TASP1Q9H6P5 420 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 APOBEC3GQ9HC16 384 aaKnown RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 ACOT13Q9NPJ3 140 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 SAGE1Q9NXZ1 904 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 COL20A1Q9P218 1284 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 GTF2IRD1Q9UHL9 959 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 CIB4A0PJX0 185 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 TFECO14948 347 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 SLC16A4O15374 487 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 USP2O75604 605 aaPredicted RBP15.57■□□□□ 0.08
RTN3-205ENST00000356000 SUPT20HL2P0C7V6 817 aa15.57■□□□□ 0.08
RTN3-205ENST00000356000 KELP23276 732 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms