RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CNTD1Q8N815 330 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 SHKBP1Q8TBC3 707 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 SOCS4Q8WXH5 440 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 ZNF224Q9NZL3 707 aa13.95□□□□□ -0.18
SREBF1-202ENST00000355815 G3V2T6 193 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 H3BMM5 538 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 LRATO95237 230 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 TSPAN19P0C672 248 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 MSH3P20585 1137 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 SLC26A3P40879 764 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 MTHFRP42898 656 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 MAGEA10P43363 369 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 RFX3P48380 749 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PURAQ00577 322 aaKnown RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PRKCZQ05513 592 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 TGFBIQ15582 683 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 DET1Q7L5Y6 550 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 ANKLE1Q8NAG6 615 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 OR10T2Q8NGX3 314 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 ARNTL2Q8WYA1 636 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 NMUR1Q9HB89 426 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 DUSP11O75319 330 aaKnown RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 KLHL18O94889 574 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 KCNE1P15382 129 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 GATMP50440 423 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 COX10Q12887 443 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 QPRTQ15274 297 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 OR52E8Q6IFG1 317 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PLET1Q6UQ28 207 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 ZYG11AQ6WRX3 759 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 SLC22A16Q86VW1 577 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 CEP97Q8IW35 865 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 TBC1D21Q8IYX1 336 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 IKZF3Q9UKT9 509 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 NME7Q9Y5B8 376 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 LRRC14BA6NHZ5 514 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 THRBP10828 461 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 HAPLN1P10915 354 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 CCNCP24863 283 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 BCAP31P51572 246 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 MERTKQ12866 999 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 RFX4Q33E94 735 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
SREBF1-202ENST00000355815 RGMBQ6NW40 437 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 LRRC49Q8IUZ0 686 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 DBF4BQ8NFT6 615 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 OR4L1Q8NH43 312 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PTPN18Q99952 460 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 SERHL2Q9H4I8 314 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 SP140LQ9H930 580 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 SERHLQ9NQF3 203 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 DYRK4Q9NR20 520 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 ACTL7AQ9Y615 435 aa13.94□□□□□ -0.18
SREBF1-202ENST00000355815 PBLDP30039 288 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 HSPA14Q0VDF9 509 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 PRKG2Q13237 762 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 P2RY8Q86VZ1 359 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 GPSM1Q86YR5 675 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 WDR36Q8NI36 951 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 FNDC8Q8TC99 324 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 GPR21Q99679 349 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 EHD1Q9H4M9 534 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 IFT80Q9P2H3 777 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 PTGDR2Q9Y5Y4 395 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 HS3ST4Q9Y661 456 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 LTBP3Q9NS15 1303 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 GOT2P00505 430 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 TRAP1Q12931 704 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 CDK15Q96Q40 435 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 UNC93B1Q9H1C4 597 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 RMND5AQ9H871 391 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 SNX4O95219 450 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 S100A3P33764 101 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 CD68P34810 354 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 CLCN5P51795 746 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 RPL38P63173 70 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 LIPEQ05469 1076 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 TSNQ15631 228 aaKnown RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 KLHL12Q53G59 568 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 LRRC73Q5JTD7 316 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 FAM151BQ6UXP7 276 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 EPHX4Q8IUS5 362 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 MCOLN3Q8TDD5 553 aa13.93□□□□□ -0.18
SREBF1-202ENST00000355815 OTUB1Q96FW1 271 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-202ENST00000355815 SACM1LQ9NTJ5 587 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms