RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 HBEGFQ99075 208 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 MAGEH1Q9H213 219 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 FAM86C2PA6NEL3 165 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 UNC5BQ8IZJ1 945 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 GRIN2DO15399 1336 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TGDSO95455 350 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 CCT3P49368 545 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 MAPK12P53778 367 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ZYG11AQ6WRX3 759 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 YTHDF3Q7Z739 585 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ZMIZ2Q8NF64 920 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 OR52J3Q8NH60 311 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 JSRP1Q96MG2 331 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 EFR3BQ9Y2G0 817 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 MAGEB3O15480 346 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ASMTP46597 345 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ARF5P84085 180 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 HSPB3Q12988 150 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 LARS2Q15031 903 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 HGSNATQ68CP4 663 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 RELTQ969Z4 430 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 SCLYQ96I15 445 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TRPS1Q9UHF7 1281 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 XKRYO14609 159 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 PLOD3O60568 738 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 C8AP07357 584 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 LAMP2P13473 410 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 L1CAMP32004 1257 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 PBX1P40424 430 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 CHIT1Q13231 466 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TBC1D21Q8IYX1 336 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 GAL3ST4Q96RP7 486 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 SYT17Q9BSW7 474 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 NMUR2Q9GZQ4 415 aa13.1□□□□□ -0.31
SCN8A-202ENST00000355133 A0A1W2PQ67 120 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 STX16O14662 325 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 PGRMC2O15173 223 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 SIM2Q14190 667 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-202ENST00000355133 SNAPC1Q16533 368 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 KAT2AQ92830 837 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 ELOVL2Q9NXB9 296 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 FZD10Q9ULW2 581 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 CASKO14936 926 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 HTR7P34969 479 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 HID1Q8IV36 788 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 KREMEN2Q8NCW0 462 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
SCN8A-202ENST00000355133 ABCB8Q9NUT2 735 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 ALKBH4Q9NXW9 302 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 RYKP34925 604 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 CAPGP40121 348 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 PBX3P40426 434 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 NDST2P52849 883 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 LAPTM5Q13571 262 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 GRB14Q14449 540 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 AP3S1Q92572 193 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 EFNA1P20827 205 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-202ENST00000355133 DAOAP59103 153 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 GAD2Q05329 585 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 RFTN2Q52LD8 501 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-202ENST00000355133 DENND5AQ6IQ26 1287 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 LIX1Q8N485 282 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 PIGKQ92643 395 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 C1GALT1C1Q96EU7 318 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 ART5Q96L15 291 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 GPER1Q99527 375 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
SCN8A-202ENST00000355133 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.31
SCN8A-202ENST00000355133 CLDN4O14493 209 aa13.08□□□□□ -0.31
SCN8A-202ENST00000355133 FABP3P05413 133 aa13.08□□□□□ -0.31
SCN8A-202ENST00000355133 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.31
SCN8A-202ENST00000355133 ANKRD46Q86W74 232 aa13.08□□□□□ -0.31
SCN8A-202ENST00000355133 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms