RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ITKQ08881 620 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ZIK1Q3SY52 487 aaPredicted RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 PYCR3Q53H96 274 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SULT1C3Q6IMI6 304 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 C14orf80Q86SX3 495 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SYVN1Q86TM6 617 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 DTWD1Q8N5C7 304 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SH3RF2Q8TEC5 729 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 GIPC2Q8TF65 315 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 MBOAT4Q96T53 435 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 CGREF1Q99674 301 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ADNPQ9H2P0 1102 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 NECTIN3Q9NQS3 549 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 FBXO8Q9NRD0 319 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 INTS7Q9NVH2 962 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 FAM32AQ9Y421 112 aaKnown RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 C9JVG2 144 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 M0QX08 132 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 HAS3O00219 553 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SLC16A6O15403 523 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 E2F6O75461 281 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 GABARAPO95166 117 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 IL12AP29459 219 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SERPINB10P48595 397 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 CLCNKBP51801 687 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 DSC2Q02487 901 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SLC10A7Q0GE19 358 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SMU1Q2TAY7 513 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 AGAP7PQ5VUJ5 663 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 CASP10Q92851 521 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ZYG11BQ9C0D3 744 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM165Q9HC07 324 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 ANKHQ9HCJ1 492 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 SEMA4BQ9NPR2 832 aaPredicted RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 DAPK2Q9UIK4 370 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 PCDHGA8Q9Y5G5 932 aa11.3□□□□□ -0.6
CAPN9-202ENST00000354537 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
CAPN9-202ENST00000354537 OR51F1A6NGY5 319 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF99A8MXY4 864 aaPredicted RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 B4GAT1O43505 415 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SCELO95171 688 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 PCMT1P22061 227 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 CES1P23141 567 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HOXD12P35452 270 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 IDUAP35475 653 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 GRK3P35626 688 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 AQP6Q13520 282 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 MFSD10Q14728 455 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SPCS2Q15005 226 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 CTF1Q16619 201 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ATP6AP1LQ52LC2 224 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 GPRIN3Q6ZVF9 776 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 FUBP1Q96AE4 644 aaKnown RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 NODALQ96S42 347 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SH3GL1Q99961 368 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HGH1Q9BTY7 390 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SP110Q9HB58 689 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SLAMF8Q9P0V8 285 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TLR6Q9Y2C9 796 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TIMM13Q9Y5L4 95 aaPredicted RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 IGLV3-10A0A075B6K4 115 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 FAM92AA1XBS5 289 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 NDUFS2O75306 463 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 RHOBTB1O94844 696 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HTR1AP08908 422 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TCF3P15923 654 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HTR1BP28222 390 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ISL1P61371 349 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 SEMA3AQ14563 771 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 IHHQ14623 411 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 OR5K1Q8NHB7 308 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF583Q96ND8 569 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 ARMC7Q9H6L4 198 aa11.29□□□□□ -0.6
CAPN9-202ENST00000354537 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
CAPN9-202ENST00000354537 TIMM22Q9Y584 194 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms