RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PHF21BQ96EK2 531 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 SORT1Q99523 831 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 NCKIPSDQ9NZQ3 722 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 DNAJC16Q9Y2G8 782 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 UBXN8O00124 270 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 IPO13O94829 963 aaKnown RBP20.27■□□□□ 0.84
TRIM4-202ENST00000354241 DNTTP04053 509 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 CD72P21854 359 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 TAS2R38P59533 333 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 DNAJB13P59910 316 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 CCDC15Q0P6D6 951 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 IFT88Q13099 833 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 LDLRAP1Q5SW96 308 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 PRPF38BQ5VTL8 546 aaKnown RBP20.27■□□□□ 0.84
TRIM4-202ENST00000354241 ATG14Q6ZNE5 492 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 TMPRSS6Q8IU80 811 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 SLC22A9Q8IVM8 553 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 PELI3Q8N2H9 469 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 DEFB123Q8N688 67 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 RPLP0P6Q8NHW5 317 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 C10orf82Q8WW14 230 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 ATOH8Q96SQ7 321 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 FBRSQ9HAH7 460 aa20.27■□□□□ 0.84
TRIM4-202ENST00000354241 MBD1Q9UIS9 605 aaPredicted RBP20.27■□□□□ 0.84
TRIM4-202ENST00000354241 TSPAN6O43657 245 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 AP1G1O43747 822 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 MAGEC1O60732 1142 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 KERAO60938 352 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 TPBGLP0DKB5 382 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 IL9P15248 144 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 GPR1P46091 355 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 RGS4P49798 205 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 PIWIL4Q7Z3Z4 852 aaKnown RBP20.26■□□□□ 0.83
TRIM4-202ENST00000354241 SPATS2Q86XZ4 545 aaKnown RBP20.26■□□□□ 0.83
TRIM4-202ENST00000354241 MSANTD3Q96H12 275 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 FBXL12Q9NXK8 326 aa20.26■□□□□ 0.83
TRIM4-202ENST00000354241 A0A0G2JND7 137 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 SUPT3HB4E1H0 165 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 K7ESM1 405 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 SUPT3HO75486 399 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 DGKAP23743 735 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 CREB5Q02930 508 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 RCN2Q14257 317 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 TTLL9Q3SXZ7 439 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 ACSBG2Q5FVE4 666 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 CFAP157Q5JU67 520 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 TRIM67Q6ZTA4 783 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 PHYKPLQ8IUZ5 450 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 TMEM237Q96Q45 408 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 DRC3Q9H069 523 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 SLC2A4RGQ9NR83 387 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 KCTD5Q9NXV2 234 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 NDRG2Q9UN36 371 aaKnown RBP20.25■□□□□ 0.83
TRIM4-202ENST00000354241 TRPM6Q9BX84 2022 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 IGLON5A6NGN9 336 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 SHISA7A6NL88 538 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 TM7SF2O76062 418 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 SOD1P00441 154 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 CCR10P46092 362 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 MYO1HQ8N1T3 1032 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 FUBP1Q96AE4 644 aaKnown RBP20.25■□□□□ 0.83
TRIM4-202ENST00000354241 PDLIM5Q96HC4 596 aaKnown RBP20.25■□□□□ 0.83
TRIM4-202ENST00000354241 PLCD4Q9BRC7 762 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 USH1CQ9Y6N9 552 aa20.25■□□□□ 0.83
TRIM4-202ENST00000354241 ANKRD12Q6UB98 2062 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 OR2AG2A6NM03 316 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 AP2A2O94973 939 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 CHRNGP07510 517 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 GFAPP14136 432 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 CCR7P32248 378 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 ARFIP2P53365 341 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 DPTQ07507 201 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 FBXO43Q4G163 708 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 C6orf89Q6UWU4 347 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 PTGR2Q8N8N7 351 aaPredicted RBP20.24■□□□□ 0.83
TRIM4-202ENST00000354241 PIWIL2Q8TC59 973 aaKnown RBP20.24■□□□□ 0.83
TRIM4-202ENST00000354241 RMDN2Q96LZ7 410 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 TMEM120AQ9BXJ8 343 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 LATS2Q9NRM7 1088 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 PNPOQ9NVS9 261 aa20.24■□□□□ 0.83
TRIM4-202ENST00000354241 SYCE1LA8MT33 242 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 EOGTQ5NDL2 527 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 KCNK13Q9HB14 408 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 CNOT6Q9ULM6 557 aaKnown RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 PRR23AA6NEV1 266 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 HGSO14964 777 aaPredicted RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 NPHS1O60500 1241 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 MTHFD2P13995 350 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 NFKB2Q00653 900 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 TFF2Q03403 129 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 TMEM115Q12893 351 aaPredicted RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 CCINQ13939 588 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 PFKFB4Q16877 469 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 ARL13AQ5H913 290 aaPredicted RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 SEL1L3Q68CR1 1132 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 RAB44Q7Z6P3 723 aaPredicted RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 TRIM74Q86UV6 250 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 GPSM1Q86YR5 675 aa20.23■□□□□ 0.83
TRIM4-202ENST00000354241 WDR75Q8IWA0 830 aaKnown RBP20.23■□□□□ 0.83
TRIM4-202ENST00000354241 FBXO39Q8N4B4 442 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms