RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 NPHS1O60500 1241 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 NDUFB10O96000 172 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 LTA4HP09960 611 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 HIST1H2AGP0C0S8 130 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 HLA-EP13747 358 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 HIST1H2ADP20671 130 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 HK3P52790 923 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 RPS8P62241 208 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 FASTKD3Q14CZ7 662 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 USP39Q53GS9 565 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 RAP1GAP2Q684P5 730 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ARMC6Q6NXE6 501 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 TSPAN33Q86UF1 283 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 OR7G3Q8NG95 312 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CELF1Q92879 486 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 DYNLL2Q96FJ2 89 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SERAC1Q96JX3 654 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 HIST1H2AHQ96KK5 128 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SLC38A2Q96QD8 506 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 HIST1H2AJQ99878 128 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 H2AFJQ9BTM1 129 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 LIN7BQ9HAP6 207 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ZFYVE1Q9HBF4 777 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 COQ3Q9NZJ6 369 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PTGFRNQ9P2B2 879 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 TRHDEQ9UKU6 1024 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CNTNAP2Q9UHC6 1331 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 DISP2A7MBM2 1401 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ADAMTS13Q76LX8 1427 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ATG2BQ96BY7 2078 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 RAB19A4D1S5 217 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 AGAP5A6NIR3 686 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 UBE2Q2LH0YL09 131 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SOX30O94993 753 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 HGFP14210 728 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 DNASE1P24855 282 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PDHA2P29803 388 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 DDOSTP39656 456 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CDKN2CP42773 168 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 GRSF1Q12849 480 aaKnown RBP eCLIP4.99□□□□□ -1.61
SKP1-202ENST00000353411 CNTN1Q12860 1018 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ATP6AP1Q15904 470 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PIGGQ5H8A4 983 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PCID2Q5JVF3 399 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PXDC1Q5TGL8 231 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 LAPTM4BQ86VI4 370 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 RHOXF1Q8NHV9 184 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 DENND1AQ8TEH3 1009 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 DCAKDQ8WVC6 231 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 BTN2A2Q8WVV5 523 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SMG7Q92540 1137 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 TMIGD2Q96BF3 282 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 PCDHAC1Q9H158 963 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 JPH1Q9HDC5 661 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 RASSF1Q9NS23 344 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SNTG1Q9NSN8 517 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CCM2LQ9NUG4 571 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 TBC1D24Q9ULP9 559 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 GTF2A1LQ9UNN4 478 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CHURC1-FNTBB4DL54 471 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 MT-CO1P00395 513 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ERVK-10P10266 1014 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 TPSB2P20231 275 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CDC20Q12834 499 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 TPSAB1Q15661 275 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 FBXL19Q6PCT2 694 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 LRRN1Q6UXK5 716 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ZBTB33Q86T24 672 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SCUBE3Q8IX30 993 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 C12orf45Q8N5I9 185 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ZBED3Q96IU2 234 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 DPYSL5Q9BPU6 564 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 LRRC3Q9BY71 257 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 C2orf40Q9H1Z8 148 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SYNDIG1Q9H7V2 258 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 KIAA1257Q9ULG3 409 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 NR2E1Q9Y466 385 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 MEIOCA2RUB1 952 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 RHPN2P1A8MT19 583 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 C9IYK1 514 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CYB561D2O14569 222 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SLC37A4O43826 429 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 XPNPEP2O43895 674 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 BANF1O75531 89 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 OR56A5P0C7T3 313 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 CES1P23141 567 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 MPSTP25325 297 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 FMO4P31512 558 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 EFNA5P52803 228 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 EEFSECP57772 596 aaKnown RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 PEX6Q13608 980 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 MTMR1Q13613 665 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 SIM2Q14190 667 aaPredicted RBP4.99□□□□□ -1.61
SKP1-202ENST00000353411 SEC23AQ15436 765 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 RAB11FIP2Q7L804 512 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ESX1Q8N693 406 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 COQ8AQ8NI60 647 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 ASIC4Q96FT7 647 aa4.99□□□□□ -1.61
SKP1-202ENST00000353411 C10orf90Q96M02 699 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms