RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SYNCRIPO60506 623 aaKnown RBP24.26■■□□□ 1.47
CPNE1-202ENST00000352393 TULP3O75386 442 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 OR4F21O95013 312 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 ALBP02768 609 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 RPLP2P05387 115 aaKnown RBP24.26■■□□□ 1.47
CPNE1-202ENST00000352393 INHBBP09529 407 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 CD247P20963 164 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 MAGEA11P43364 429 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 PRKG2Q13237 762 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 TAF1AQ15573 450 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-202ENST00000352393 NEDD8Q15843 81 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 C10orf120Q5SQS8 335 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 ACBD5Q5T8D3 534 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-202ENST00000352393 FAM117BQ6P1L5 589 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 GLT6D1Q7Z4J2 308 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 OR13F1Q8NGS4 319 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 GPR152Q8TDT2 470 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 ACTL7AQ9Y615 435 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 ANKRD12Q6UB98 2062 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 FRMPD3Q5JV73 1810 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 DNAH12Q6ZR08 3092 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 VPS26AO75436 327 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 POLR2IP36954 125 aaKnown RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CDKN1CP49918 316 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ANKDD1AQ495B1 522 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 GLYATQ6IB77 296 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 Q6ZSR9 355 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CHST15Q7LFX5 561 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 DTWD1Q8N5C7 304 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 MDGA1Q8NFP4 955 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 BORCS5Q969J3 196 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 PIF1Q9H611 641 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 PCDHB5Q9Y5E4 795 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ST14Q9Y5Y6 855 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 VWA8A3KMH1 1905 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 FOXD2O60548 495 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 NIPSNAP2O75323 286 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 PKMP14618 531 aaKnown RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 JUNBP17275 347 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 TACR2P21452 398 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CD9P21926 228 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ALDH3A2P51648 485 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ARSFP54793 590 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 SELPLGQ14242 412 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ATP6AP1LQ52LC2 224 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CTSL3PQ5NE16 218 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 TMEM214Q6NUQ4 689 aaKnown RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ZNF280BQ86YH2 543 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CDYL2Q8N8U2 506 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 SIDT2Q8NBJ9 832 aaKnown RBP24.25■■□□□ 1.47
CPNE1-202ENST00000352393 CD200R1Q8TD46 325 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ESAMQ96AP7 390 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 ZNF510Q9Y2H8 683 aa24.25■■□□□ 1.47
CPNE1-202ENST00000352393 A0A0D9SEW6 157 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 RGRP47804 291 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 FKBP1BP68106 108 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 RING1Q06587 406 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 CBX2Q14781 532 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-202ENST00000352393 ZNF829Q3KNS6 432 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-202ENST00000352393 GPSM1Q86YR5 675 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 TANKQ92844 425 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 LINGO1Q96FE5 620 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 MUS81Q96NY9 551 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 ACTL8Q9H568 366 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 TBC1D23Q9NUY8 699 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 TRMT6Q9UJA5 497 aaKnown RBP24.24■■□□□ 1.47
CPNE1-202ENST00000352393 VPS9D1Q9Y2B5 631 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 NEUROG3Q9Y4Z2 214 aa24.24■■□□□ 1.47
CPNE1-202ENST00000352393 ARNTLO00327 626 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 ELK4P28324 431 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 SHMT2P34897 504 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 ERVPABLB-1P60509 514 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 DAG1Q14118 895 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 OTUD3Q5T2D3 398 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-202ENST00000352393 PSAPL1Q6NUJ1 521 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 RALGPS2Q86X27 583 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-202ENST00000352393 PIANPQ8IYJ0 282 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 SFRP1Q8N474 314 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 OR52B6Q8NGF0 335 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 PSKH2Q96QS6 385 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 SEPT3Q9UH03 358 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 DEAF1O75398 565 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-202ENST00000352393 ALPLP05186 524 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 DSC1Q08554 894 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 LETMD1Q6P1Q0 360 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 DCBLD1Q8N8Z6 715 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 EEF1AKMT1Q8WVE0 214 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 SNRNP27Q8WVK2 155 aaKnown RBP24.23■■□□□ 1.47
CPNE1-202ENST00000352393 TMBIM1Q969X1 311 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 ZBED2Q9BTP6 218 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 CD274Q9NZQ7 290 aa24.23■■□□□ 1.47
CPNE1-202ENST00000352393 TMEM189-UBE2V1I3L0A0 370 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 PRLP01236 227 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 HNRNPCP07910 306 aaKnown RBP eCLIP24.22■■□□□ 1.477e-7■■■□□ 17.1
CPNE1-202ENST00000352393 RAP2AP10114 183 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 MBL2P11226 248 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-202ENST00000352393 MTPNP58546 118 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ANKRD26P1Q6NSI1 321 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 ITIH5Q86UX2 942 aa24.22■■□□□ 1.47
CPNE1-202ENST00000352393 RBM12BQ8IXT5 1001 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms