RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 RNF31Q96EP0 1072 aa10.56□□□□□ -0.72
CAPN3-203ENST00000349748 OPALINQ96PE5 141 aa10.56□□□□□ -0.72
CAPN3-203ENST00000349748 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-203ENST00000349748 FRMD8P1Q9BZ68 369 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-203ENST00000349748 GTSE1Q9NYZ3 720 aa10.56□□□□□ -0.72
CAPN3-203ENST00000349748 CCDC59Q9P031 241 aaKnown RBP10.56□□□□□ -0.72
CAPN3-203ENST00000349748 NAALAD2Q9Y3Q0 740 aa10.56□□□□□ -0.72
CAPN3-203ENST00000349748 UBDO15205 165 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 OGTO15294 1046 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 TBC1D4O60343 1298 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 HOXB1P14653 301 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SAT1P21673 171 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 MAGEA3P43357 314 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 AKR1D1P51857 326 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 DAB2P98082 770 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 PRKCDQ05655 676 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 DDR2Q16832 855 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 UBE2J2Q8N2K1 259 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 JOSD2Q8TAC2 188 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 UBXN10Q96LJ8 280 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 TEKT5Q96M29 485 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ZDHHC15Q96MV8 337 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ACCSQ96QU6 501 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 PIP5K1AQ99755 562 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SDCBP2Q9H190 292 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 PPA2Q9H2U2 334 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 FBRSL1Q9HCM7 1045 aaKnown RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 IFT46Q9NQC8 304 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 VTI1BQ9UEU0 232 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ANAPC2Q9UJX6 822 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 PMM2O15305 246 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SH3BP5O60239 455 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 PTP4A3O75365 173 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 NDUFS6O75380 124 aaKnown RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SLC22A5O76082 557 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 DDNO94850 711 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 LCKP06239 509 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 HNRNPLP14866 589 aaKnown RBP eCLIP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 AZGP1P25311 298 aaKnown RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 HMGCLP35914 325 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SCNN1GP51170 649 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 MAP2K6P52564 334 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ORC1Q13415 861 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 RIN1Q13671 783 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SQLEQ14534 574 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SETMARQ53H47 684 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SPANXN2Q5MJ10 180 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ZNF704Q6ZNC4 412 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 RDH11Q8TC12 318 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 STON2Q8WXE9 905 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ST8SIA4Q92187 359 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 RADILQ96JH8 1075 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ACOX2Q99424 681 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 C12orf57Q99622 126 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SLC25A23Q9BV35 468 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 TASP1Q9H6P5 420 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 INTS7Q9NVH2 962 aaKnown RBP10.55□□□□□ -0.72
CAPN3-203ENST00000349748 CD274Q9NZQ7 290 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 TJP2Q9UDY2 1190 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 ANKRD6Q9Y2G4 727 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 HSPE1-MOB4S4R3N1 261 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 LTBP1Q14766 1721 aa10.55□□□□□ -0.72
CAPN3-203ENST00000349748 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 UPK1AO00322 258 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 NR5A2O00482 541 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ATP6AP2O75787 350 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 RGS20O76081 388 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 MT-ND2P03891 347 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 CSF2P04141 144 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 GPIP06744 558 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ACADMP11310 421 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 YWHAQP27348 245 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 HOXA13P31271 388 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 HNF1BP35680 557 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TGFBR2P37173 567 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 KCNAB2Q13303 367 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ELOAQ14241 798 aaKnown RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 PSMD5Q16401 504 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 VPS26BQ4G0F5 336 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 LIPMQ5VYY2 423 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 RPS27LQ71UM5 84 aaKnown RBP10.54□□□□□ -0.72
CAPN3-203ENST00000349748 AADATQ8N5Z0 425 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 SPPL2BQ8TCT7 592 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 B3GALT6Q96L58 329 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 PPP1R2P1Q96PQ5 205 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 ANKHQ9HCJ1 492 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 MAP10Q9P2G4 905 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
CAPN3-203ENST00000349748 TRAV20A0A0B4J274 112 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms