RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ITIH5Q86UX2 942 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 ACTL8Q9H568 366 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 TLR8Q9NR97 1041 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 LEF1Q9UJU2 399 aaPredicted RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 FAF1Q9UNN5 650 aaPredicted RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 TDRD15B5MCY1 1934 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 NT5C1B-RDH14C9J2C7 533 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 H3BMQ9 156 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 GIPC1O14908 333 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 VNN2O95498 520 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 PKMP14618 531 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 ABRAXAS1Q6UWZ7 409 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 DLEU7Q6UYE1 221 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 DTWD1Q8N5C7 304 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 CD200R1Q8TD46 325 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 LINC01599Q8WXQ3 324 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 COG8Q96MW5 612 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 MGME1Q9BQP7 344 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 CARS2Q9HA77 564 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 IL37Q9NZH6 218 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 ZMYM5Q9UJ78 669 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 UTS2RQ9UKP6 389 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 TRPM7Q96QT4 1865 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 MYO16Q9Y6X6 1858 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 TRIM64A6NGJ6 449 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 CAPN1P07384 714 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 CYBAP13498 195 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 ITGB6P18564 788 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 GATMP50440 423 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 ERVK-8P63133 956 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 RFTN2Q52LD8 501 aaPredicted RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 PATL1Q86TB9 770 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 ADAMTS16Q8TE57 1224 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 OSBPL6Q9BZF3 934 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 BRINP2Q9C0B6 783 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 DNAAF2Q9NVR5 837 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 F5H5T6 163 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 CBX4O00257 560 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 HOXB8P17481 243 aaPredicted RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 SHMT2P34897 504 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 EMX2Q04743 252 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 FOXM1Q08050 763 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 AARS2Q5JTZ9 985 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 AFTPHQ6ULP2 937 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 IL27RAQ6UWB1 636 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 TAS2R42Q7RTR8 314 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 HS3ST5Q8IZT8 346 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 TNIP2Q8NFZ5 429 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 METTL6Q8TCB7 284 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 PEX13Q92968 403 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 SUN2Q9UH99 717 aa17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 TRMT6Q9UJA5 497 aaKnown RBP17.88■□□□□ 0.45
PTP4A3-202ENST00000349124 SYCE1LA8MT33 242 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 UPK1AO00322 258 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 INSIG1O15503 277 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 VPS4BO75351 444 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 GJB5O95377 273 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 CHEK2O96017 543 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 CA5AP35218 305 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 MBTPS1Q14703 1052 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 TGFBIQ15582 683 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 COQ5Q5HYK3 327 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 TBC1D21Q8IYX1 336 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 OR56A4Q8NGH8 313 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 PSKH2Q96QS6 385 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 GKN1Q9NS71 199 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 TUBA8Q9NY65 449 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 FAM92AA1XBS5 289 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 MAPKAPK2P49137 400 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 IL2P60568 153 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 TAF1AQ15573 450 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 HID1Q8IV36 788 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 DENND1CQ8IV53 801 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 HIPK3Q9H422 1215 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 UBA2Q9UBT2 640 aaPredicted RBP17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 SEPT3Q9UH03 358 aa17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 PTBP2Q9UKA9 531 aaKnown RBP17.87■□□□□ 0.45
PTP4A3-202ENST00000349124 C2orf81A6NN90 581 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 KLK8O60259 260 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 VPS26AO75436 327 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 MLYCDO95822 493 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 GUCA1CO95843 209 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 MATN1P21941 496 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 EEF1B2P24534 225 aaKnown RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 ZNF157P51786 506 aaPredicted RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 EEFSECP57772 596 aaKnown RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 ADARB1P78563 741 aaKnown RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 BNIP3Q12983 259 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 LAPTM5Q13571 262 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 ATP6AP1LQ52LC2 224 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 NKAPQ8N5F7 415 aaKnown RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 ISG20Q96AZ6 181 aaKnown RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 SPC25Q9HBM1 224 aa17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 IFT80Q9P2H3 777 aaPredicted RBP17.86■□□□□ 0.45
PTP4A3-202ENST00000349124 PCDHGA11Q9Y5H2 935 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms