RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 BCL7AQ4VC05 210 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 SLC23A3Q6PIS1 610 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 ENPP7Q6UWV6 458 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 GALNT7Q86SF2 657 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 IQCKQ8N0W5 287 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 OXR1Q8N573 874 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 EPS8L3Q8TE67 593 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 SLC44A1Q8WWI5 657 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 TCF12Q99081 682 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 LRRC61Q9BV99 259 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 CLPBQ9H078 707 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 CYP4F12Q9HCS2 524 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 ZNF446Q9NWS9 450 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 UCKL1Q9NWZ5 548 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 ZFATQ9P243 1243 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 MTO1Q9Y2Z2 717 aaKnown RBP12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 DGKBQ9Y6T7 804 aa12.55□□□□□ -0.4
ERGIC3-202ENST00000348547 CEP295Q9C0D2 2601 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 LNP1A1A4G5 178 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 TNFRSF10CO14798 259 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 VEGFDO43915 354 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CDK14O94921 469 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CFIP05156 583 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 PYGLP06737 847 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 UQCRHP07919 91 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 NUDT17P0C025 328 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 GIMD1P0DJR0 217 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 ATP1B2P14415 290 aaPredicted RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 RPS3P23396 243 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■□□□ 13.7
ERGIC3-202ENST00000348547 GNPDA1P46926 289 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 PRLHRP49683 370 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 THOP1P52888 689 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 NHLH1Q02575 133 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 OVGP1Q12889 678 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 ZNF460Q14592 562 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 ZNF423Q2M1K9 1284 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 TRIM61Q5EBN2 209 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CERS6Q6ZMG9 384 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 ASCL5Q7RTU5 278 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 PARGQ86W56 976 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 SLC26A11Q86WA9 606 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 HID1Q8IV36 788 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 VRK3Q8IV63 474 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CEP97Q8IW35 865 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CYP4X1Q8N118 509 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 MZB1Q8WU39 189 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 HNRNPLLQ8WVV9 542 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 VPS39Q96JC1 886 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CYTH2Q99418 400 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 RBBP8Q99708 897 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 AARSD1Q9BTE6 412 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CAB39LQ9H9S4 337 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 INTS10Q9NVR2 710 aaKnown RBP12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 KLQ9UEF7 1012 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
ERGIC3-202ENST00000348547 CNOT1A5YKK6 2376 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 PTPRZ1P23471 2315 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 UBA6A0AVT1 1052 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TOR1BO14657 336 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 PRMT5O14744 637 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 SDC3O75056 442 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 NDUFS3O75489 264 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 ASMTLO95671 621 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 CSF2P04141 144 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TUBBP07437 444 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 RETP07949 1114 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 ITGB6P18564 788 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 MSH3P20585 1137 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 MCM3P25205 808 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 AK4P27144 223 aaPredicted RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 CCR7P32248 378 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 NSG1P42857 185 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 CLCN7P51798 805 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 HK3P52790 923 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TAS2R39P59534 338 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 IL9RQ01113 521 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TMEM220Q6QAJ8 160 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 RD3Q7Z3Z2 195 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 LRRC6Q86X45 466 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 TRAPPC5Q8IUR0 188 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 CTAGE3PQ8IX95 158 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 LMNTD2Q8IXW0 634 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
ERGIC3-202ENST00000348547 KCNH6Q9H252 994 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms