RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 NPIPA8P0DM63 369 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 BMP6P22004 513 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 DGKAP23743 735 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 OR1D2P34982 312 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 NDUFV1P49821 464 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 C1orf189Q5VU69 101 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 COLGALT2Q8IYK4 626 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 MEIOBQ8N635 442 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 VAT1Q99536 393 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF416Q9BWM5 594 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 NOL11Q9H8H0 719 aaKnown RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 GFOD1Q9NXC2 390 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ANKDD1BA6NHY2 528 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 MDM4O15151 490 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ULK1O75385 1050 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ZDHHC11BP0C7U3 371 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 UMPSP11172 480 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CDK4P11802 303 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 AMD1P17707 334 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CES1P23141 567 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 SDC2P34741 201 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 RPL22P35268 128 aaKnown RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 ABRQ12979 859 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CYP2A13Q16696 494 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 LIN54Q6MZP7 749 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 COMMD2Q86X83 199 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 C1QTNF7Q9BXJ2 289 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 IL22Q9GZX6 179 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 GBA3Q9H227 469 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 INTS10Q9NVR2 710 aaKnown RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 COPZ2Q9P299 210 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 PLEKHA6Q9Y2H5 1048 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CNTNAP1P78357 1384 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM25EA8MYX2 175 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 FAM220BPB1ANY3 271 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 PLOD2O00469 737 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CD3EAPO15446 510 aaKnown RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 AVILO75366 819 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CYP1A1P04798 512 aaPredicted RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 ERCC2P18074 760 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 DUSP4Q13115 394 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 NOGQ13253 232 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 DCLRE1AQ6PJP8 1040 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 MAFIPQ8WZ33 124 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 TLCD1Q96CP7 247 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 KLHL5Q96PQ7 755 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 RNF157Q96PX1 679 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 PRDM12Q9H4Q4 367 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CD93Q9NPY3 652 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 RCCD1A6NED2 376 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 ADH1AP07327 375 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 HOXC6P09630 235 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CSH1P0DML2 217 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CSH2P0DML3 217 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 GLDCP23378 1020 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 RPL6Q02878 288 aaKnown RBP11□□□□□ -0.65
SMARCE1-202ENST00000348513 THAP5Q7Z6K1 395 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CDK20Q8IZL9 346 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 CD99L2Q8TCZ2 262 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 REPS1Q96D71 796 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 PHOX2BQ99453 314 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 DHRS9Q9BPW9 319 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 FTHL17Q9BXU8 183 aa11□□□□□ -0.65
SMARCE1-202ENST00000348513 NEDD8-MDP1E9PL57 170 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 H3BN98 237 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 OR2B3O76000 313 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 ERBB2P04626 1255 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 ZNF37AP17032 561 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 GABRR2P28476 465 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 DGKQP52824 942 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 TAS2R40P59535 323 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 HTRA4P83105 476 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 C9orf57Q5W0N0 161 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 OR52E8Q6IFG1 317 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 MSANTD1Q6ZTZ1 278 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 PCDH20Q8N6Y1 951 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 OR5T2Q8NGG2 359 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 PPTC7Q8NI37 304 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 TCEAL4Q96EI5 215 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 FGFBP2Q9BYJ0 223 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 AASSQ9UDR5 926 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 CCL16O15467 120 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 PAPSS1O43252 624 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 TLR5O60602 858 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 TRIM3O75382 744 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 HPCAL1P37235 193 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 NOMO3P69849 1222 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 DBPQ10586 325 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 NOMO1Q15155 1222 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 AP5B1Q2VPB7 878 aa10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCE1-202ENST00000348513 IRAK1BP1Q5VVH5 260 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms