RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NUAK2Q9H093 628 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 KIAA1522Q9P206 1035 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 A8MX80 341 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 TBL1XO60907 577 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 RNASEH2AO75792 299 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 CCDC142Q17RM4 750 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 PLPP4Q5VZY2 271 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ARL10Q8N8L6 244 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 DCBLD1Q8N8Z6 715 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 GPR152Q8TDT2 470 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 PSMG2Q969U7 264 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 HHIPL1Q96JK4 782 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 IFT80Q9P2H3 777 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 SATB2Q9UPW6 733 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 FAM234BA2RU67 622 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 EFCAB10A6NFE3 127 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 FAM220BPB1ANY3 271 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 PENKP01210 267 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 CNPP09543 421 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 PBLDP30039 288 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 YBEYP58557 167 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 MPPE1Q53F39 396 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 TTC30BQ8N4P2 665 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 TXNDC5Q8NBS9 432 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 C2CD4AQ8NCU7 369 aaPredicted RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 SUSD3Q96L08 255 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 NODALQ96S42 347 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 C16orf70Q9BSU1 422 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 LRRC3Q9BY71 257 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ATP13A3Q9H7F0 1226 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ACTR3BQ9P1U1 418 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 GMPRP36959 345 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 PBX3P40426 434 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 GNPDA1P46926 289 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 INAQ16352 499 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 LYPLAL1Q5VWZ2 237 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CASP12Q6UXS9 341 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 TMEM135Q86UB9 458 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MRM3Q9HC36 420 aaKnown RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 GMIPQ9P107 970 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ZNHIT2Q9UHR6 403 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 INSL6Q9Y581 213 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CLDN25C9JDP6 229 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 C1QTNF3-AMACRE9PGA6 284 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 SDHDO14521 159 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 IRAK2O43187 625 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CDH1P12830 882 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MAGEA6P43360 314 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 PAGE2BQ5JRK9 111 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 PAGE2Q7Z2X7 111 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 C12orf43Q96C57 262 aaKnown RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 PANX1Q96RD7 426 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MIEF1Q9NQG6 463 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ZDHHC7Q9NXF8 308 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 EHD3Q9NZN3 535 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ZNF490Q9ULM2 529 aaPredicted RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 DNAJC25-GNG10A0A024R161 153 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MFN2O95140 757 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 SCELO95171 688 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 STBD1O95210 358 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ATP4BP51164 291 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CPSF6Q16630 551 aaKnown RBP eCLIP14.59□□□□□ -0.07
NUP50-201ENST00000347635 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 TPGS1Q6ZTW0 290 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 RPS27LQ71UM5 84 aaKnown RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 OSTM1Q86WC4 334 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CFAP52Q8N1V2 620 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 BRSK1Q8TDC3 778 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ZNF296Q8WUU4 475 aaPredicted RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 CAPSLQ8WWF8 208 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 EIF2B4Q9UI10 523 aaKnown RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 GABRQQ9UN88 632 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 KLHL20Q9Y2M5 609 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 OR51F1A6NGY5 319 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 SIX3O95343 332 aaPredicted RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 OR4Q2P0C623 313 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 NR4A1P22736 598 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 TM4SF4P48230 202 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ATAD1Q8NBU5 361 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CLHC1Q8NHS4 586 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MOCOSQ96EN8 888 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 SORT1Q99523 831 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 LRTM1Q9HBL6 345 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ARL5AQ9Y689 179 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 DLEC1Q9Y238 1755 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 PCDH8O95206 1070 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ANGPTL1O95841 491 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 GPR15P49685 360 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CDC42P60953 191 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 ZNF33AQ06730 810 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MORN1Q5T089 497 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 EGFL6Q8IUX8 553 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 RBFAQ8N0V3 343 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 MTERF3Q96E29 417 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 IPPKQ9H8X2 491 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 CNOT11Q9UKZ1 510 aaKnown RBP14.59□□□□□ -0.07
NUP50-201ENST00000347635 CORO2BQ9UQ03 480 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
NUP50-201ENST00000347635 A0A1W2PQ67 120 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms