RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NRG1Q02297 640 aaPredicted RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 PUS10Q3MIT2 529 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 DCST1Q5T197 706 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 NETO2Q8NC67 525 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 GAL3ST4Q96RP7 486 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RBM4BQ9BQ04 359 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RBM4Q9BWF3 364 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 INSIG1O15503 277 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RLN1P04808 185 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 IFNW1P05000 195 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 GPR107Q5VW38 600 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 PNPT1Q8TCS8 783 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 PIGKQ92643 395 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 SLC38A4Q969I6 547 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 MECRQ9BV79 373 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 B3GNT5Q9BYG0 378 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 TRIM2Q9C040 744 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RPL26L1Q9UNX3 145 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 TNFRSF11BO00300 401 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 MPZL2O60487 215 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 OTOP2Q7RTS6 562 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 TMEM192Q8IY95 271 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 LEMD2Q8NC56 503 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 WDR12Q9GZL7 423 aaKnown RBP22.9■■□□□ 1.26
NPAS3-201ENST00000346562 SRMSQ9H3Y6 488 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 IPPKQ9H8X2 491 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 FBXW2Q9UKT8 454 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 A0A1W2PRG6 482 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 GNSP15586 552 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 BLKP51451 505 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 UBXN11Q5T124 520 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 C1GALT1C1Q96EU7 318 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 RAB11FIP5Q9BXF6 653 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 GTF2IRD1Q9UHL9 959 aa22.9■■□□□ 1.26
NPAS3-201ENST00000346562 TSPAN1O60635 241 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 WFS1O76024 890 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 MPSTP25325 297 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 ALDH4A1P30038 563 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 PPP3R1P63098 170 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 NOL11Q9H8H0 719 aaKnown RBP22.89■■□□□ 1.26
NPAS3-201ENST00000346562 OR2AG2A6NM03 316 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 ASLP04424 464 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 C8GP07360 202 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 SWI5Q1ZZU3 235 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 SLC30A6Q6NXT4 461 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 RASGEF1AQ8N9B8 481 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 HIST1H2AAQ96QV6 131 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.26
NPAS3-201ENST00000346562 FAM237AA0A1B0GTK4 181 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 WRBO00258 174 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 IGFBP5P24593 272 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 TAS2R50P59544 299 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 LDLRAP1Q5SW96 308 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 VITQ6UXI7 678 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 ING5Q8WYH8 240 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 IFT80Q9P2H3 777 aaPredicted RBP22.89■■□□□ 1.25
NPAS3-201ENST00000346562 CNOT6Q9ULM6 557 aaKnown RBP22.89■■□□□ 1.25
NPAS3-201ENST00000346562 MGAT4AQ9UM21 535 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 AP4B1Q9Y6B7 739 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 ALDH3A2P51648 485 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 PTPN20Q4JDL3 420 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 PERM1Q5SV97 790 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 GLYATQ6IB77 296 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 ZYG11AQ6WRX3 759 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 OR2L5Q8NG80 312 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 ALKBH4Q9NXW9 302 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 TCAF1Q9Y4C2 921 aa22.89■■□□□ 1.25
NPAS3-201ENST00000346562 BTBD19C9JJ37 291 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 AQP1P29972 269 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CCNFP41002 786 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 PCDH1Q08174 1060 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 TMEM63BQ5T3F8 832 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 PGBD2Q6P3X8 592 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 LINGO4Q6UY18 593 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CDH7Q9ULB5 785 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 DSC2Q02487 901 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 SAMD14Q8IZD0 417 aaPredicted RBP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 LRRN4CLQ8ND94 238 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 EFHD2Q96C19 240 aaPredicted RBP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 SLC25A51Q9H1U9 297 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 IL1RAPQ9NPH3 570 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 DNAJA2O60884 412 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 LGR5O75473 907 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 FRRS1Q6ZNA5 592 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CCDC36Q8IYA8 594 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 DQX1Q8TE96 717 aaKnown RBP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 TREHO43280 583 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 ZNF208O43345 1280 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 KERAO60938 352 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 DDX6P26196 483 aaKnown RBP eCLIP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CLCNKBP51801 687 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 IL18Q14116 193 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 GRIK5Q16478 980 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CXorf57Q6NSI4 855 aaKnown RBP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 DDX3YO15523 660 aaKnown RBP22.88■■□□□ 1.25
NPAS3-201ENST00000346562 AP2A1O95782 977 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CCKBRP32239 447 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 KHKP50053 298 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms