RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LIN7AO14910 233 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 NIPSNAP2O75323 286 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 IPO13O94829 963 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 SERPINA6P08185 405 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 HNRNPLP14866 589 aaKnown RBP eCLIP9.15□□□□□ -0.948e-11■■■□□ 18.4
ATG4A-202ENST00000345734 SERPINA4P29622 427 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 SLC26A3P40879 764 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 VIPR2P41587 438 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 NRIP1P48552 1158 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 TTPAP49638 278 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 RPL14P50914 215 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 DNAJB13P59910 316 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 RPL26P61254 145 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 KRT72Q14CN4 511 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 GEN1Q17RS7 908 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 CARD16Q5EG05 197 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 TCEAL5Q5H9L2 206 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 FAM219BQ5XKK7 198 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 FAM91A1Q658Y4 838 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 EPGNQ6UW88 154 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 VN1R2Q8NFZ6 395 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 C17orf50Q8WW18 174 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 EZH1Q92800 747 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 ISG20Q96AZ6 181 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 GPR21Q99679 349 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 CCDC106Q9BWC9 280 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 CCDC68Q9H2F9 335 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 ZDHHC6Q9H6R6 413 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 CDH22Q9UJ99 828 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 RPL26L1Q9UNX3 145 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 APOBEC2Q9Y235 224 aaKnown RBP9.15□□□□□ -0.94
ATG4A-202ENST00000345734 PLXNB3Q9ULL4 1909 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 CAPN8A6NHC0 703 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 NPIPB15A6NHN6 443 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 IQCF5A8MTL0 148 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PRR5-ARHGAP8B1AHC4 643 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 TMEM233B4DJY2 109 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 MATN2O00339 956 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GRID2O43424 1007 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 NPHS1O60500 1241 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CCDC22O60826 627 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT2B4P06133 528 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ENO1P06733 434 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PKMP14618 531 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 HOXB8P17481 243 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CPA2P48052 419 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ARHGAP8P85298 464 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CACNG1Q06432 222 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PRKAA1Q13131 559 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 DHCR24Q15392 516 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 LRRC73Q5JTD7 316 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CFAP157Q5JU67 520 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ELMSAN1Q6PJG2 1045 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 MYLK4Q86YV6 388 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 APLFQ8IW19 511 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 SIDT2Q8NBJ9 832 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 FAM81AQ8TBF8 368 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ASIC4Q96FT7 647 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 MIPEPQ99797 713 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 OSBPL1AQ9BXW6 950 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 STN1Q9H668 368 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 POPDC3Q9HBV1 291 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 KLC4Q9NSK0 619 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 TAS2R13Q9NYV9 303 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 NCKIPSDQ9NZQ3 722 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 LNPEPQ9UIQ6 1025 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 EYSQ5T1H1 3165 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GOLGA8QA0A0J9YX86 632 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GOLGA8OA6NCC3 632 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GOLGA8NF8WBI6 632 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UBXN8O00124 270 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 NEMP1O14524 444 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PRAMEF1O95521 474 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CYP17A1P05093 508 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 JUNP05412 331 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ESRRAP11474 423 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 BPIP17213 487 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT1A6P19224 532 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT1A1P22309 533 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT1A4P22310 534 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PTPN4P29074 926 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT1A3P35503 534 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 UGT1A5P35504 534 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 MAGEA10P43363 369 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GPLD1P80108 840 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ASPHQ12797 758 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ILF2Q12905 390 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 CRTC1Q6UUV9 634 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 RFLNAQ6ZTI6 216 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PIWIL4Q7Z3Z4 852 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 LONP2Q86WA8 852 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 SERPINA9Q86WD7 417 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 PCDH20Q8N6Y1 951 aaKnown RBP9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GOLM1Q8NBJ4 401 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 FBXO27Q8NI29 283 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GRIN3AQ8TCU5 1115 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 GDPD5Q8WTR4 605 aa9.14□□□□□ -0.95
ATG4A-202ENST00000345734 ZFAND2BQ8WV99 257 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms