RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IER5LQ5T953 404 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 SBSNQ6UWP8 590 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 SLC22A9Q8IVM8 553 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 CCDC126Q96EE4 140 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 TRMT61BQ9BVS5 477 aaKnown RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 THAP10Q9P2Z0 257 aaPredicted RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 G3BP2Q9UN86 482 aaKnown RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 APOBEC2Q9Y235 224 aaKnown RBP13.4□□□□□ -0.26
CDC42-202ENST00000344548 COMMD10Q9Y6G5 202 aa13.4□□□□□ -0.26
CDC42-202ENST00000344548 PLXNA2O75051 1894 aa13.4□□□□□ -0.27
CDC42-202ENST00000344548 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.27
CDC42-202ENST00000344548 SMIM24O75264 130 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 ENO1P06733 434 aaKnown RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 XPAP23025 273 aaPredicted RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 EEF1DP29692 281 aaKnown RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 NSG1P42857 185 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 MAGEA9P43362 315 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 GALK1P51570 392 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 TGFBIQ15582 683 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 PHKG1Q16816 387 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 SEL1L3Q68CR1 1132 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 VRK3Q8IV63 474 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 OR8D1Q8WZ84 308 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 KCNA7Q96RP8 456 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 SIKE1Q9BRV8 207 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 SLC40A1Q9NP59 571 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 PTGDR2Q9Y5Y4 395 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 F8W8V4 182 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 H3BQ06 376 aaPredicted RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 AREL1O15033 823 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 KLK8O60259 260 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 PRNPP04156 253 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
CDC42-202ENST00000344548 PPP1R3AQ16821 1122 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 TRPC4APQ8TEL6 797 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 MARK4Q96L34 752 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 ZNF225Q9UK10 706 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
CDC42-202ENST00000344548 TMEM202A6NGA9 273 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 A8MUI8 341 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 K7EQS6 105 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 INPP4BO15327 924 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 MMP20O60882 483 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SOD1P00441 154 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ITGB7P26010 798 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SEC13P55735 322 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 CREB5Q02930 508 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 BTKQ06187 659 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ACOX1Q15067 660 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ITPRIPL2Q3MIP1 535 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 UGT3A2Q3SY77 523 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 LYPLAL1Q5VWZ2 237 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ZBTB2Q8N680 514 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 DCBLD1Q8N8Z6 715 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SMRP1Q8NCR6 262 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 TMIEQ8NEW7 156 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SUSD6Q92537 303 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 PDLIM5Q96HC4 596 aaKnown RBP13.38□□□□□ -0.27
CDC42-202ENST00000344548 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SEMA4BQ9NPR2 832 aaPredicted RBP13.38□□□□□ -0.27
CDC42-202ENST00000344548 TCF7L2Q9NQB0 619 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 TXLNGQ9NUQ3 528 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 DNAH14Q0VDD8 3507 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 OR2AG2A6NM03 316 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 H0YHG0 523 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 SDHDO14521 159 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 DCXO43602 365 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 RASSF9O75901 435 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ADRB3P13945 408 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
CDC42-202ENST00000344548 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
CDC42-202ENST00000344548 GRIA2P42262 883 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 PSMD8P48556 350 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 ASPHQ12797 758 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 FAM91A1Q658Y4 838 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 MBOAT1Q6ZNC8 495 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 GPSM1Q86YR5 675 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 POU5F2Q8N7G0 328 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 C3orf30Q96M34 536 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 COQ10AQ96MF6 247 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 FAM161BQ96MY7 647 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 TTC1Q99614 292 aa13.38□□□□□ -0.27
CDC42-202ENST00000344548 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms