RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 LEF1Q9UJU2 399 aaPredicted RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 INTS6Q9UL03 887 aaKnown RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 TIMM13Q9Y5L4 95 aaPredicted RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 SIP14410 1827 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 SLC22A1O15245 554 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 HLA-DQB2P05538 268 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 PIRTP0C851 137 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 RAP2AP10114 183 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 ITIH1P19827 911 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 CXCR2P25025 360 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 ISL1P61371 349 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 CDK5R2Q13319 367 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 SOWAHCQ53LP3 525 aaPredicted RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 LAIR1Q6GTX8 287 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 CCBE1Q6UXH8 406 aaPredicted RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 DEPDC4Q8N2C3 294 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 TTC39CQ8N584 583 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 OR10A6Q8NH74 314 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 RNF167Q9H6Y7 350 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 MAGEE1Q9HCI5 957 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 C8orf4Q9NR00 106 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 THG1LQ9NWX6 298 aaKnown RBP14.72□□□□□ -0.05
CLCN1-201ENST00000343257 ADGRE2Q9UHX3 823 aa14.72□□□□□ -0.05
CLCN1-201ENST00000343257 AP3D1O14617 1153 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 DYRK3O43781 588 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 UPK1BO75841 260 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 CHRNB1P11230 501 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 EIF2DP41214 584 aaKnown RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 ATP6AP1LQ52LC2 224 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 OSTM1Q86WC4 334 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 PTRH1Q86Y79 214 aaKnown RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 ELMOD1Q8N336 334 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 ZNF540Q8NDQ6 660 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 AFG1LQ8WV93 481 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 SPATA17Q96L03 361 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 UBXN10Q96LJ8 280 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 ZBED2Q9BTP6 218 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 FAM50BQ9Y247 325 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 FNDC3AQ9Y2H6 1198 aaKnown RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 BCKDKO14874 412 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 HOXC11O43248 304 aaPredicted RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 TSPAN1O60635 241 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 PRKD3O94806 890 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 PRSS23O95084 383 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 MASP1P48740 699 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 CBX2Q14781 532 aaPredicted RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 CLCA4Q14CN2 919 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 RBBP7Q16576 425 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 BEND5Q7L4P6 421 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 FAM162AQ96A26 154 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 AURKBQ96GD4 344 aaPredicted RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 BTN2A3PQ96KV6 586 aa14.71□□□□□ -0.05
CLCN1-201ENST00000343257 BARD1Q99728 777 aaKnown RBP14.71□□□□□ -0.05
CLCN1-201ENST00000343257 LOC100506127A0A0U1RQW1 187 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 NCAM2O15394 837 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 CD36P16671 472 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 ZNF37AP17032 561 aaPredicted RBP14.71□□□□□ -0.06
CLCN1-201ENST00000343257 EEFSECP57772 596 aaKnown RBP14.71□□□□□ -0.06
CLCN1-201ENST00000343257 CCDC58Q4VC31 144 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 SNAP47Q5SQN1 464 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 C9orf57Q5W0N0 161 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 LRRC49Q8IUZ0 686 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 OR2T11Q8NH01 316 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 PYCR2Q96C36 320 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 TXNDC15Q96J42 360 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 BTBD2Q9BX70 525 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 OSBPL10Q9BXB5 764 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 LRRC3Q9BY71 257 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 FAM49AQ9H0Q0 323 aaPredicted RBP14.71□□□□□ -0.06
CLCN1-201ENST00000343257 AMBNQ9NP70 447 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 PLSCR3Q9NRY6 295 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 TREX1Q9NSU2 369 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 C14orf119Q9NWQ9 140 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 COMMD8Q9NX08 183 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 CPA4Q9UI42 421 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 PCDHGA10Q9Y5H3 936 aa14.71□□□□□ -0.06
CLCN1-201ENST00000343257 ASB14A6NK59 587 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 MTSS1O43312 755 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 DFNA5O60443 496 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 C22orf31O95567 290 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 WNT3AP56704 352 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 FBXO47Q5MNV8 452 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 VARS2Q5ST30 1063 aaKnown RBP14.7□□□□□ -0.06
CLCN1-201ENST00000343257 CATSPERGQ6ZRH7 1159 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 PROSER1Q86XN7 944 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 CDYL2Q8N8U2 506 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 PIK3C3Q8NEB9 887 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 APPL2Q8NEU8 664 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 BEST2Q8NFU1 509 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 TRIB2Q92519 343 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 PROX1Q92786 737 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 SLC47A1Q96FL8 570 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 TSPAN17Q96FV3 270 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 TRMOQ9BU70 441 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 SLIRPQ9GZT3 109 aaKnown RBP14.7□□□□□ -0.06
CLCN1-201ENST00000343257 DCSTAMPQ9H295 470 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 NXF3Q9H4D5 531 aaKnown RBP14.7□□□□□ -0.06
CLCN1-201ENST00000343257 ACTR8Q9H981 624 aa14.7□□□□□ -0.06
CLCN1-201ENST00000343257 FBXO8Q9NRD0 319 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms