RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 MAGEC1O60732 1142 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TRIM13O60858 407 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 EDF1O60869 148 aaKnown RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 H2AFYO75367 372 aaKnown RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 WISP3O95389 354 aaPredicted RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 SERPINE1P05121 402 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 GM2AP17900 193 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 GRK2P25098 689 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 BST1Q10588 318 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 SGCGQ13326 291 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TECRLQ5HYJ1 363 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZNF765Q7L2R6 523 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 BMP8AQ7Z5Y6 402 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 PGBD3Q8N328 593 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 PPP4R1Q8TF05 950 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 EEF1AKMT1Q8WVE0 214 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 VPS35Q96QK1 796 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 SLC30A3Q99726 388 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 KCTD5Q9NXV2 234 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TMPRSS11EQ9UL52 423 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 RNF112Q9ULX5 631 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 MRPS17Q9Y2R5 130 aaKnown RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZNF318Q5VUA4 2279 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3DA0A087WVF3 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3IA0A087WXS9 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3EA0A087X179 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3KA0A087X1G2 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3FA6NER0 549 aaPredicted RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3LB9A6J9 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 SMIM24O75264 130 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3HP0C7X1 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 B4GALNT1Q00973 533 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZNF648Q5T619 568 aaPredicted RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3GQ6DHY5 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3CQ6IPX1 549 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ISCA2Q86U28 154 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 FAM124AQ86V42 546 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D3Q8IZP1 549 aaPredicted RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ZBTB2Q8N680 514 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 ANKS4BQ8N8V4 417 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 DDHD1Q8NEL9 900 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 STAG3L4Q8TBR4 150 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 CCDC126Q96EE4 140 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 THOC1Q96FV9 657 aaKnown RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 TFB2MQ9H5Q4 396 aaKnown RBP17.12■□□□□ 0.33
CLDN4-201ENST00000340958 OXSMQ9NWU1 459 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 MMP17Q9ULZ9 603 aa17.12■□□□□ 0.33
CLDN4-201ENST00000340958 IGLV3-16A0A075B6K0 115 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 PCCBP05166 539 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 TROVE2P10155 538 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 FGF3P11487 239 aaPredicted RBP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 DGKAP23743 735 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 ATP5F1P24539 256 aaPredicted RBP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 SLC1A6P48664 564 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 PRKAA2P54646 552 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 TAS2R38P59533 333 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 PRKCQQ04759 706 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 CFAP157Q5JU67 520 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 SPATA21Q7Z572 469 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 KBTBD6Q86V97 674 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 CRLF3Q8IUI8 442 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 CACNA2D3Q8IZS8 1091 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 MYO1HQ8N1T3 1032 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 POLMQ9NP87 494 aaPredicted RBP17.11■□□□□ 0.33
CLDN4-201ENST00000340958 THAP1Q9NVV9 213 aa17.11■□□□□ 0.33
CLDN4-201ENST00000340958 OR2AG2A6NM03 316 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 QSOX1O00391 747 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 DLX3O60479 287 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 AP2A2O94973 939 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 TPBGLP0DKB5 382 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 DPTQ07507 201 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 OVGP1Q12889 678 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
CLDN4-201ENST00000340958 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CKAP5Q14008 2032 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 LRRC32Q14392 662 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 UBXN2BQ14CS0 331 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SEL1L3Q68CR1 1132 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
CLDN4-201ENST00000340958 TMEM92Q6UXU6 159 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 FRA10AC1Q70Z53 315 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 RAB44Q7Z6P3 723 aaPredicted RBP17.1■□□□□ 0.33
CLDN4-201ENST00000340958 FBXL6Q8N531 539 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CCNYL1Q8N7R7 359 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 LKAAEAR1Q8TD35 194 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SKA2Q8WVK7 121 aaPredicted RBP17.1■□□□□ 0.33
CLDN4-201ENST00000340958 HMGB4Q8WW32 186 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 KIAA1191Q96A73 305 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SHDQ96IW2 340 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 MRGPRX1Q96LB2 322 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 OSBPL6Q9BZF3 934 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CYP4F12Q9HCS2 524 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 NPEPPSL1A6NEC2 478 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms