RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PROS1P07225 676 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 C1QTNF9P0C862 333 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 ACRV1P26436 265 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 CTSCP53634 463 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 CCL7P80098 99 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 HHEXQ03014 270 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 CLPPQ16740 277 aaPredicted RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 LRRC8BQ6P9F7 803 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 IYDQ6PHW0 289 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 SERPINA9Q86WD7 417 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 OR6P1Q8NGX9 317 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 AHCYL2Q96HN2 611 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 STRADBQ9C0K7 418 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 NRSN2Q9GZP1 204 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 DDX47Q9H0S4 455 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 CCDC86Q9H6F5 360 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 XAB2Q9HCS7 855 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 KCNK4Q9NYG8 393 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 SLC23A2Q9UGH3 650 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 ASIC3Q9UHC3 531 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 ANAPC5Q9UJX4 755 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 AK5Q9Y6K8 562 aa18.88■□□□□ 0.61
SYNE4-202ENST00000340477 TPRP12270 2363 aaKnown RBP18.88■□□□□ 0.61
SYNE4-202ENST00000340477 TRBV5-4A0A0C4DH59 114 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 TRABD2BA6NFA1 517 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 CCDC188H7C350 402 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 QSOX1O00391 747 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 NTN3O00634 580 aaPredicted RBP18.87■□□□□ 0.61
SYNE4-202ENST00000340477 ATP1B2P14415 290 aaPredicted RBP18.87■□□□□ 0.61
SYNE4-202ENST00000340477 CASQ1P31415 396 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 DMPKQ09013 629 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 KCNJ11Q14654 390 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 NR1D2Q14995 579 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 ISXQ2M1V0 245 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 AMZ1Q400G9 498 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 BCL7AQ4VC05 210 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 FASTKD1Q53R41 847 aaKnown RBP18.87■□□□□ 0.61
SYNE4-202ENST00000340477 AARS2Q5JTZ9 985 aaKnown RBP18.87■□□□□ 0.61
SYNE4-202ENST00000340477 AGAP9Q5VTM2 703 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 ARMC3Q5W041 872 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 ZNF449Q6P9G9 518 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 ZCCHC14Q8WYQ9 949 aaKnown RBP18.87■□□□□ 0.61
SYNE4-202ENST00000340477 HDAC10Q969S8 669 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 SGF29Q96ES7 293 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 TMEM74Q96NL1 305 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 SAMD15Q9P1V8 674 aa18.87■□□□□ 0.61
SYNE4-202ENST00000340477 SPEGQ15772 3267 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CCDC162PA2VCL2 907 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 A6NCN8 305 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CPNE6O95741 557 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 EML2O95834 649 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 VIPP01282 170 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 PSMA3P25788 255 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 MGAT1P26572 445 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 MAGEA6P43360 314 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 OR1D5P58170 312 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 GPLD1P80108 840 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 ITIH4Q14624 930 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CASC4Q6P4E1 433 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 WASH2PQ6VEQ5 465 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CERS6Q6ZMG9 384 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 C11orf96Q7Z7L8 435 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 BEND7Q8N7W2 519 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-202ENST00000340477 OR13J1Q8NGT2 312 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 OR4L1Q8NH43 312 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 OR10G6Q8NH81 332 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CXorf40BQ96DE9 158 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 DPYSL5Q9BPU6 564 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 WASH6PQ9NQA3 447 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 CPNE7Q9UBL6 633 aa18.86■□□□□ 0.61
SYNE4-202ENST00000340477 A0A1W2PQM1 296 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 MGAT4DA6NG13 374 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PPM1DO15297 605 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 DUX1O43812 170 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 AP2A2O94973 939 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 GOT2P00505 430 aaKnown RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 MLNP12872 115 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PAMP19021 973 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 RPL10P27635 214 aaKnown RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 CA5AP35218 305 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 NSG1P42857 185 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PRLHRP49683 370 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 ARSDP51689 593 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 DRG2P55039 364 aaKnown RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 INHBCP55103 352 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 B4GALNT1Q00973 533 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 ACVR1Q04771 509 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 CAMK2BQ13554 666 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 DBN1Q16643 649 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 SYDE1Q6ZW31 735 aaPredicted RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PCGF5Q86SE9 256 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PIM3Q86V86 326 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 CREG2Q8IUH2 290 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 KLHL7Q8IXQ5 586 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 RBM12BQ8IXT5 1001 aaKnown RBP18.85■□□□□ 0.61
SYNE4-202ENST00000340477 PPIL6Q8IXY8 311 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 OTUD6BQ8N6M0 293 aa18.85■□□□□ 0.61
SYNE4-202ENST00000340477 OR2L2Q8NH16 312 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms