RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CYP4B1P13584 511 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 CTPS1P17812 591 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 MC4RP32245 332 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 RPL38P63173 70 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 C6orf136Q5SQH8 315 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 HACD2Q6Y1H2 254 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 PIWIL3Q7Z3Z3 882 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 GALNT5Q7Z7M9 940 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 PHYKPLQ8IUZ5 450 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 TBC1D21Q8IYX1 336 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 SMYD1Q8NB12 490 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 BRSK1Q8TDC3 778 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 FAM162AQ96A26 154 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 FUBP1Q96AE4 644 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 SNAP91O60641 907 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 VPS26AO75436 327 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 GPIP06744 558 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 CCNA2P20248 432 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 HMGCS1Q01581 520 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 PRKG2Q13237 762 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 PTGR1Q14914 329 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 ENPP6Q6UWR7 440 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF598Q86UK7 904 aaKnown RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 UMODL1-AS1Q8N2C9 162 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 PLEKHA8Q96JA3 519 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 GLT1D1Q96MS3 346 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 FAM193BQ96PV7 902 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 SPC25Q9HBM1 224 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF225Q9UK10 706 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 TLR6Q9Y2C9 796 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 SH3PXD2BA1X283 911 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 TNFRSF10BO14763 440 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 STX7O15400 261 aaKnown RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 DFNA5O60443 496 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 KERAO60938 352 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 HRH2P25021 359 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 GALNT1Q10472 559 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 FAM110CQ1W6H9 321 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 AP5B1Q2VPB7 878 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 CTXN3Q4LDR2 81 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 C8orf82Q6P1X6 216 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 GCNT7Q6ZNI0 430 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 R3HCC1LQ7Z5L2 792 aaKnown RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 PHACTR4Q8IZ21 702 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 DTWD1Q8N5C7 304 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 TMCO5AQ8N6Q1 288 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 MFSD2AQ8NA29 543 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 OR56A4Q8NGH8 313 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 GTF3C2Q8WUA4 911 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-201ENST00000340437 KIAA1191Q96A73 305 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 MYLKQ15746 1914 aa14.24□□□□□ -0.13
CPSF7-201ENST00000340437 H0Y626 953 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 HAS3O00219 553 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TRIM16O95361 564 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 CST1P01037 141 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 FCGR1AP12314 374 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 GSSP48637 474 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 BMXP51813 675 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 BBS5Q8N3I7 341 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 SLC15A4Q8N697 577 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 CDC26Q8NHZ8 85 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 SKA2Q8WVK7 121 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 GFM2Q969S9 779 aaKnown RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 AURKBQ96GD4 344 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TFB2MQ9H5Q4 396 aaKnown RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 CIDEBQ9UHD4 219 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ATP4BP51164 291 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 IL2P60568 153 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 DGCR6Q14129 220 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 SAPCD2Q86UD0 394 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ANKRD46Q86W74 232 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ZDHHC13Q8IUH4 622 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 OSCP1Q8WVF1 389 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 RIC8BQ9NVN3 520 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 AIG1Q9NVV5 245 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 C2orf81A6NN90 581 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 K7EPI3 171 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 FGF1P05230 155 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 FGF4P08620 206 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 AGXTP21549 392 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 HSPA7P48741 367 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ERVPABLB-1P60509 514 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 SERINC3Q13530 473 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 CCNYL2Q5T2Q4 361 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 UTS2BQ765I0 119 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 MDGA1Q8NFP4 955 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ASB2Q96Q27 587 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TRIM54Q9BYV2 358 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TOR3AQ9H497 397 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 TRNAU1APQ9NX07 287 aaKnown RBP14.23□□□□□ -0.13
CPSF7-201ENST00000340437 ADGRE2Q9UHX3 823 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 CORINQ9Y5Q5 1042 aa14.23□□□□□ -0.13
CPSF7-201ENST00000340437 SYCE1LA8MT33 242 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 TLR5O60602 858 aa14.22□□□□□ -0.13
CPSF7-201ENST00000340437 DEAF1O75398 565 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-201ENST00000340437 PAPSS2O95340 614 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms