RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 OLR1P78380 273 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GRM3Q14832 879 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 NKX1-1Q15270 411 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 BAK1Q16611 211 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SPATS1Q496A3 300 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RBM48Q5RL73 367 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 LAIR1Q6GTX8 287 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 LETMD1Q6P1Q0 360 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 SCUBE3Q8IX30 993 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 C2orf69Q8N8R5 385 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 KDM1BQ8NB78 822 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 ACVR1CQ8NER5 493 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 DNERQ8NFT8 737 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 CLHC1Q8NHS4 586 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 MYRFLQ96LU7 910 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 RAVER2Q9HCJ3 691 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 FBRSL1Q9HCM7 1045 aaKnown RBP9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 DMAC2Q9NW81 257 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 GIMAP2Q9UG22 337 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 MUTYHQ9UIF7 546 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
PTCHD4-201ENST00000339488 KCNN4O15554 427 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GMDSO60547 372 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 LRCH4O75427 683 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 LDLRP01130 860 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 PRKACGP22612 351 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GRK5P34947 590 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 HTR7P34969 479 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 RAB25P57735 213 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF124Q15973 351 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 DDR2Q16832 855 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 PRSS36Q5K4E3 855 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 KRT73Q86Y46 540 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 CDH26Q8IXH8 852 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 OR6C4Q8NGE1 309 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 NANPQ8TBE9 248 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 FEZF2Q8TBJ5 459 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 HEXDCQ8WVB3 486 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 COQ8BQ96D53 544 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TWNKQ96RR1 684 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 FIZ1Q96SL8 496 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 ESRP2Q9H6T0 727 aaKnown RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 MRM3Q9HC36 420 aaKnown RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 SPON1Q9HCB6 807 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GTSE1Q9NYZ3 720 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 SLC45A1Q9Y2W3 748 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 SLC22A7Q9Y694 548 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 COMMD10Q9Y6G5 202 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 MN1Q10571 1320 aaPredicted RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 LINC00862A6NCI5 91 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 K7ENM7 598 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 SOCS7O14512 581 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 KCNQ2O43526 872 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 RD3LP0DJH9 198 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 ERVK-10P10266 1014 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GADD45AP24522 165 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 MYL9P24844 172 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 IL5RAQ01344 420 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 CREB3L2Q70SY1 520 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TMEM199Q8N511 208 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TRPV3Q8NET8 790 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 NLGN4YQ8NFZ3 816 aaPredicted RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 OR6M1Q8NGM8 313 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 CYP2W1Q8TAV3 490 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TOP1MTQ969P6 601 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 DUS3LQ96G46 650 aaKnown RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GPR78Q96P69 363 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 PCDHB16Q9NRJ7 776 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 TRMT112Q9UI30 125 aaKnown RBP9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 EDARQ9UNE0 448 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 GINS2Q9Y248 185 aa9.56□□□□□ -0.88
PTCHD4-201ENST00000339488 MROH5Q6ZUA9 1318 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 RREB1Q92766 1687 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 ASB14A6NK59 587 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 LGALS8O00214 317 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 NR5A2O00482 541 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 S100A6P06703 90 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 HNRNPLP14866 589 aaKnown RBP eCLIP9.55□□□□□ -0.886e-7■■□□□ 13.4
PTCHD4-201ENST00000339488 YWHAQP27348 245 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 SSTR2P30874 369 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 LIPAP38571 399 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 CPT1AP50416 773 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 KCNAB2Q13303 367 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 SPANXN2Q5MJ10 180 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 TAF2Q6P1X5 1199 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 DENND1BQ6P3S1 775 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF720Q7Z2F6 126 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 PLCZ1Q86YW0 608 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF680Q8NEM1 530 aa9.55□□□□□ -0.88
PTCHD4-201ENST00000339488 ATOH1Q92858 354 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms