RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SFMBT1Q9UHJ3 866 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 CNOT6Q9ULM6 557 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 MRPS23Q9Y3D9 190 aaKnown RBP10.69□□□□□ -0.7
RTN3-201ENST00000338850 FAM186AA6NE01 2351 aa10.69□□□□□ -0.7
RTN3-201ENST00000338850 NOTCH4Q99466 2003 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 A0A0J9YYE9 177 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 NEMP2A6NFY4 417 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 FXYD1O00168 92 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 UBFD1O14562 309 aaKnown RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 PRRG1O14668 218 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 PFDN6O15212 129 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CD3EAPO15446 510 aaKnown RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 CDK14O94921 469 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 LRG1P02750 347 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 ASLP04424 464 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 F7P08709 466 aaPredicted RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 ZDHHC11BP0C7U3 371 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 MTHFD2P13995 350 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CD1EP15812 388 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CEBPBP17676 345 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 PTPN2P17706 415 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 CDKN2DP55273 166 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 STARD6P59095 220 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CDKL1Q00532 357 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 SLC10A7Q0GE19 358 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 RCAN2Q14206 197 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 SMU1Q2TAY7 513 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 MAP7D1Q3KQU3 841 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CTXN3Q4LDR2 81 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 ZNF789Q5FWF6 425 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 XKR7Q5GH72 579 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 MTX3Q5HYI7 312 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 TPGS2Q68CL5 300 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 ZNF280DQ6N043 979 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 PAOXQ6QHF9 649 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 TMEM207Q6UWW9 146 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CAMK1DQ8IU85 385 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 METTL25Q8N6Q8 603 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 TERB1Q8NA31 727 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 STAG3L4Q8TBR4 150 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 TWIST2Q8WVJ9 160 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 PTERQ96BW5 349 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 KXD1Q9BQD3 176 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 C9orf16Q9BUW7 83 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 FOXQ1Q9C009 403 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 MAGEH1Q9H213 219 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 SLC52A3Q9NQ40 469 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 CATSPERZQ9NTU4 200 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 NLE1Q9NVX2 485 aaPredicted RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 GDE1Q9NZC3 331 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.68□□□□□ -0.7
RTN3-201ENST00000338850 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 UXTQ9UBK9 157 aaPredicted RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 SLC8A2Q9UPR5 921 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 MYRFQ9Y2G1 1151 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 PCDHB5Q9Y5E4 795 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 INSL5Q9Y5Q6 135 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 DNAJC15Q9Y5T4 150 aa10.68□□□□□ -0.7
RTN3-201ENST00000338850 OAS3Q9Y6K5 1087 aaKnown RBP10.68□□□□□ -0.7
RTN3-201ENST00000338850 A0A1W2PP18 115 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 H7C0S8 307 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ANGPT2O15123 496 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 HTRA2O43464 458 aaPredicted RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 EEDO75530 441 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 SUPT7LO94864 414 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 MLYCDO95822 493 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 PYGLP06737 847 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 DCNP07585 359 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 SERPINF2P08697 491 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ALDOCP09972 364 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 GLULP15104 373 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 MYF6P23409 242 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ERFP50548 548 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 CDK9P50750 372 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 ARSDP51689 593 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 RPS6KA3P51812 740 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SLC7A2P52569 658 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 NME5P56597 212 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.7
RTN3-201ENST00000338850 DSC2Q02487 901 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 POLD3Q15054 466 aaPredicted RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 MLF2Q15773 248 aaPredicted RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 AASDHQ4L235 1098 aaPredicted RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 NHSL2Q5HYW2 709 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 PRSS36Q5K4E3 855 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TMTC4Q5T4D3 741 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 GPR158Q5T848 1215 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ANKS6Q68DC2 871 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 METTL2BQ6P1Q9 378 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 ZNF549Q6P9A3 640 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 BLOC1S3Q6QNY0 202 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SPRED1Q7Z699 444 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 DPP10Q8N608 796 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 PTGR2Q8N8N7 351 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms