RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 XKR5Q6UX68 686 aa15.02■□□□□ -0
PRKN-201ENST00000338468 USP53Q70EK8 1073 aa15.02■□□□□ -0
PRKN-201ENST00000338468 GPR155Q7Z3F1 870 aa15.02■□□□□ -0
PRKN-201ENST00000338468 TRAPPC5Q8IUR0 188 aa15.02■□□□□ -0
PRKN-201ENST00000338468 SLC35F6Q8N357 371 aa15.02■□□□□ -0
PRKN-201ENST00000338468 RASGEF1CQ8N431 466 aa15.02■□□□□ -0
PRKN-201ENST00000338468 LIN37Q96GY3 246 aaPredicted RBP15.02■□□□□ -0
PRKN-201ENST00000338468 MS4A14Q96JA4 679 aa15.02■□□□□ -0
PRKN-201ENST00000338468 NUDT22Q9BRQ3 303 aa15.02■□□□□ -0
PRKN-201ENST00000338468 FAM96AQ9H5X1 160 aa15.02■□□□□ -0
PRKN-201ENST00000338468 ASB8Q9H765 288 aa15.02■□□□□ -0
PRKN-201ENST00000338468 RDH14Q9HBH5 336 aa15.02■□□□□ -0
PRKN-201ENST00000338468 SARS2Q9NP81 518 aaKnown RBP15.02■□□□□ -0
PRKN-201ENST00000338468 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
PRKN-201ENST00000338468 NLE1Q9NVX2 485 aaPredicted RBP15.02■□□□□ -0
PRKN-201ENST00000338468 DNAJC16Q9Y2G8 782 aa15.02■□□□□ -0
PRKN-201ENST00000338468 JRKLQ9Y4A0 524 aa15.02■□□□□ -0
PRKN-201ENST00000338468 CCDC187A0A096LP49 1063 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 ERI2A8K979 691 aaKnown RBP15.01□□□□□ -0.01
PRKN-201ENST00000338468 H7C0S8 307 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 CPNE6O95741 557 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 PRSS56P0CW18 603 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 CSF2RBP32927 897 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 HADHAP40939 763 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 CDKN1CP49918 316 aaPredicted RBP15.01□□□□□ -0.01
PRKN-201ENST00000338468 SQSTM1Q13501 440 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 TMEM220Q6QAJ8 160 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 IGF2-ASQ6U949 168 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 ABRAXAS1Q6UWZ7 409 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 FAM83HQ6ZRV2 1179 aaPredicted RBP15.01□□□□□ -0.01
PRKN-201ENST00000338468 LINC00523Q86TU6 105 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 CCDC89Q8N998 374 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 MAIP1Q8WWC4 291 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 LRRC45Q96CN5 670 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 SEMA6CQ9H3T2 930 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 OSGEPL1Q9H4B0 414 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 TRMT1Q9NXH9 659 aaKnown RBP15.01□□□□□ -0.01
PRKN-201ENST00000338468 PAK5Q9P286 719 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 ZNF624Q9P2J8 865 aaPredicted RBP15.01□□□□□ -0.01
PRKN-201ENST00000338468 CPNE7Q9UBL6 633 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 PCDHGA8Q9Y5G5 932 aa15.01□□□□□ -0.01
PRKN-201ENST00000338468 TRBV5-4A0A0C4DH59 114 aa15□□□□□ -0.01
PRKN-201ENST00000338468 KIR2DS5A0A0G2JLQ3 304 aa15□□□□□ -0.01
PRKN-201ENST00000338468 A0A0G2JNG1 304 aa15□□□□□ -0.01
PRKN-201ENST00000338468 OR2AG2A6NM03 316 aa15□□□□□ -0.01
PRKN-201ENST00000338468 USP27XA6NNY8 438 aa15□□□□□ -0.01
PRKN-201ENST00000338468 KIR2DS3K7RE56 304 aa15□□□□□ -0.01
PRKN-201ENST00000338468 ZSCAN12O43309 604 aa15□□□□□ -0.01
PRKN-201ENST00000338468 POP7O75817 140 aaKnown RBP15□□□□□ -0.01
PRKN-201ENST00000338468 MC4RP32245 332 aa15□□□□□ -0.01
PRKN-201ENST00000338468 ACTN2P35609 894 aa15□□□□□ -0.01
PRKN-201ENST00000338468 ARSDP51689 593 aa15□□□□□ -0.01
PRKN-201ENST00000338468 HHEXQ03014 270 aa15□□□□□ -0.01
PRKN-201ENST00000338468 DMPKQ09013 629 aa15□□□□□ -0.01
PRKN-201ENST00000338468 CDH17Q12864 832 aa15□□□□□ -0.01
PRKN-201ENST00000338468 GTF2H3Q13889 308 aa15□□□□□ -0.01
PRKN-201ENST00000338468 SEPT6Q14141 434 aa15□□□□□ -0.01
PRKN-201ENST00000338468 KIR2DS5Q14953 304 aa15□□□□□ -0.01
PRKN-201ENST00000338468 CCDC38Q502W7 563 aa15□□□□□ -0.01
PRKN-201ENST00000338468 AGAP9Q5VTM2 703 aa15□□□□□ -0.01
PRKN-201ENST00000338468 TTC27Q6P3X3 843 aa15□□□□□ -0.01
PRKN-201ENST00000338468 WASH2PQ6VEQ5 465 aa15□□□□□ -0.01
PRKN-201ENST00000338468 DET1Q7L5Y6 550 aa15□□□□□ -0.01
PRKN-201ENST00000338468 SNX20Q7Z614 316 aa15□□□□□ -0.01
PRKN-201ENST00000338468 NXPE1Q8N323 547 aa15□□□□□ -0.01
PRKN-201ENST00000338468 BEND7Q8N7W2 519 aaPredicted RBP15□□□□□ -0.01
PRKN-201ENST00000338468 WDR36Q8NI36 951 aaKnown RBP15□□□□□ -0.01
PRKN-201ENST00000338468 STYXQ8WUJ0 223 aa15□□□□□ -0.01
PRKN-201ENST00000338468 FGF11Q92914 225 aa15□□□□□ -0.01
PRKN-201ENST00000338468 SGF29Q96ES7 293 aa15□□□□□ -0.01
PRKN-201ENST00000338468 CDKN2AIPNLQ96HQ2 116 aa15□□□□□ -0.01
PRKN-201ENST00000338468 TTC25Q96NG3 672 aa15□□□□□ -0.01
PRKN-201ENST00000338468 TMEM74Q96NL1 305 aa15□□□□□ -0.01
PRKN-201ENST00000338468 SLC46A1Q96NT5 459 aa15□□□□□ -0.01
PRKN-201ENST00000338468 ZCCHC2Q9C0B9 1178 aaKnown RBP15□□□□□ -0.01
PRKN-201ENST00000338468 EPB41L5Q9HCM4 733 aa15□□□□□ -0.01
PRKN-201ENST00000338468 CASS4Q9NQ75 786 aa15□□□□□ -0.01
PRKN-201ENST00000338468 WASH6PQ9NQA3 447 aa15□□□□□ -0.01
PRKN-201ENST00000338468 KCNK4Q9NYG8 393 aa15□□□□□ -0.01
PRKN-201ENST00000338468 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
PRKN-201ENST00000338468 TMEM9Q9P0T7 183 aa15□□□□□ -0.01
PRKN-201ENST00000338468 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
PRKN-201ENST00000338468 WDR37Q9Y2I8 494 aa15□□□□□ -0.01
PRKN-201ENST00000338468 IGLV3-16A0A075B6K0 115 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 PRAMEF33A0A0G2JMD5 474 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 IGHV5-10-1A0A0J9YXX1 117 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 CCDC78A2IDD5 438 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 OR5K4A6NMS3 321 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 J3QKU1 62 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 APRTP07741 180 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 HGFP14210 728 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 XRCC1P18887 633 aaPredicted RBP14.99□□□□□ -0.01
PRKN-201ENST00000338468 MSH3P20585 1137 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 RPL10P27635 214 aaKnown RBP14.99□□□□□ -0.01
PRKN-201ENST00000338468 SLC19A1P41440 591 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 DRG2P55039 364 aaKnown RBP14.99□□□□□ -0.01
PRKN-201ENST00000338468 TLE3Q04726 772 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 BIRC2Q13490 618 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 CLCA4Q14CN2 919 aa14.99□□□□□ -0.01
PRKN-201ENST00000338468 SEPT7Q16181 437 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms